Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8051N21.3 |
| Conread position: | 206-486 |
| Cow position: | chr2:972060-971783 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 152, 73 |
| Conread position: | 212-499 |
| Cow position: | chr2:46188861-46189151 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 11, 39 |
| Conread position: | 218-501 |
| Cow position: | chr2:41248793-41248512 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 112, 24 |
| Conread position: | 224-518 |
| Cow position: | chr2:38362154-38362440 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 30, 57 |
| Conread position: | 229-501 |
| Cow position: | chr2:41462206-41462482 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 118, 62 |
| Conread position: | 231-501 |
| Cow position: | chr2:18997930-18997670 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 120, 10 |
| Conread position: | 232-482 |
| Cow position: | chr2:60091224-60091469 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 85, 11 |
| Conread position: | 232-505 |
| Cow position: | chr2:46033551-46033273 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 29, 53 |
| Conread position: | 235-499 |
| Cow position: | chr2:57733640-57733376 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 150, 55 |
| Conread position: | 242-504 |
| Cow position: | chr2:13002002-13001744 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 57, 48 |
| Conread position: | 242-529 |
| Cow position: | chr2:44065770-44065496 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 93, 48 |
| Conread position: | 243-501 |
| Cow position: | chr2:45498997-45499257 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 48 |
| Conread position: | 243-501 |
| Cow position: | chr2:46052704-46052443 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 76, 17 |
| Conread position: | 243-501 |
| Cow position: | chr2:46227671-46227403 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 11, 48 |
| Conread position: | 243-502 |
| Cow position: | chr2:75600915-75600668 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 243-504 |
| Cow position: | chr2:82580731-82580989 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 142, 47 |
| Conread position: | 243-516 |
| Cow position: | chr2:40257212-40257485 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 70, 47 |
| Conread position: | 244-493 |
| Cow position: | chr2:50449706-50449959 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 103, 46 |
| Conread position: | 245-501 |
| Cow position: | chr2:44051512-44051255 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 5, 42 |
| Conread position: | 245-526 |
| Cow position: | chr2:46162156-46161874 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 9, 46 |
| Conread position: | 257-502 |
| Cow position: | chr2:45542211-45542450 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 94, 33 |
| Conread position: | 268-498 |
| Cow position: | chr2:17841811-17842035 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 115, 86 |
| Conread position: | 268-501 |
| Cow position: | chr2:19494394-19494156 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 79, 22 |
| Conread position: | 268-501 |
| Cow position: | chr2:21410409-21410161 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 22 |
| Conread position: | 268-501 |
| Cow position: | chr2:44170737-44170503 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 90, 17 |
| Conread position: | 268-505 |
| Cow position: | chr2:13684870-13684638 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 115, 22 |
| Conread position: | 268-552 |
| Cow position: | chr2:45597158-45596875 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 79, 22 |
| Conread position: | 269-548 |
| Cow position: | chr2:13672694-13672426 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 74, 21 |
| Conread position: | 289-501 |
| Cow position: | chr2:24007578-24007366 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 104, 56 |
| Conread position: | 308-536 |
| Cow position: | chr2:44222966-44222733 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 41, 26 |
| Conread position: | 320-498 |
| Cow position: | chr2:47893797-47893971 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 14 |
| Conread position: | 320-501 |
| Cow position: | chr2:45912510-45912689 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 63, 26 |
| Conread position: | 326-500 |
| Cow position: | chr2:44217786-44217963 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 15, 106 |
| Conread position: | 336-494 |
| Cow position: | chr2:30144826-30144668 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 47, 68 |
| Conread position: | 360-501 |
| Cow position: | chr2:39798328-39798184 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 375-501 |
| Cow position: | chr2:40466706-40466579 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
Show alignments to all cow chromosomes.