Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8051N21.3
        

               Conread position:
               208-505
               

               Cow position:
               chr24:230492-230192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               133, 52
               

               Conread position:
               209-501
               

               Cow position:
               chr24:5142149-5141864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               133, 32
               

               Conread position:
               218-501
               

               Cow position:
               chr24:37823732-37823448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               16, 78
               

               Conread position:
               235-501
               

               Cow position:
               chr24:37974797-37975063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               115, 7
               

               Conread position:
               243-501
               

               Cow position:
               chr24:30313850-30314109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               98, 17
               

               Conread position:
               243-518
               

               Cow position:
               chr24:27713231-27713504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               117, 17
               

               Conread position:
               260-518
               

               Cow position:
               chr24:31816738-31816479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               92, 20
               

               Conread position:
               262-501
               

               Cow position:
               chr24:37650836-37650591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               54, 28
               

               Conread position:
               268-499
               

               Cow position:
               chr24:27844378-27844608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               68, 22
               

               Conread position:
               268-502
               

               Cow position:
               chr24:11887308-11887077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               77, 12
               

               Conread position:
               299-501
               

               Cow position:
               chr24:2402246-2402448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               52, 25
               

               Conread position:
               318-501
               

               Cow position:
               chr24:39791647-39791459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               24, 0
               
Show alignments to all cow chromosomes.