Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8051N21.3 |
| Conread position: | 229-501 |
| Cow position: | chr5:63192510-63192772 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 249, 21 |
| Conread position: | 231-499 |
| Cow position: | chr5:57074097-57074362 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 93, 25 |
| Conread position: | 232-499 |
| Cow position: | chr5:59626729-59627002 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 23, 59 |
| Conread position: | 239-503 |
| Cow position: | chr5:17086782-17087055 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 58, 51 |
| Conread position: | 243-500 |
| Cow position: | chr5:30233142-30232876 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 11, 48 |
| Conread position: | 243-501 |
| Cow position: | chr5:21617683-21617427 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 84, 13 |
| Conread position: | 243-501 |
| Cow position: | chr5:57934892-57935139 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 136, 17 |
| Conread position: | 243-501 |
| Cow position: | chr5:65941022-65941282 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 104, 17 |
| Conread position: | 244-501 |
| Cow position: | chr5:20288028-20288294 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 66, 46 |
| Conread position: | 244-501 |
| Cow position: | chr5:26548911-26549172 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 11, 48 |
| Conread position: | 248-502 |
| Cow position: | chr5:40109710-40109460 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 87, 43 |
| Conread position: | 250-501 |
| Cow position: | chr5:30628929-30629189 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 85, 40 |
| Conread position: | 260-501 |
| Cow position: | chr5:66257848-66257608 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 83, 22 |
| Conread position: | 262-521 |
| Cow position: | chr5:66466525-66466268 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 66, 17 |
| Conread position: | 268-498 |
| Cow position: | chr5:69099925-69099691 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 50, 22 |
| Conread position: | 268-501 |
| Cow position: | chr5:56071064-56070826 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 50, 23 |
| Conread position: | 317-501 |
| Cow position: | chr5:61102866-61102684 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 70, 17 |
| Conread position: | 349-551 |
| Cow position: | chr5:35982615-35982822 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 34, 162 |
Show alignments to all cow chromosomes.