Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8052A12.5
        

               Conread position:
               199-710
               

               Cow position:
               chr5:19877818-19877315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               515
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               408, 7
               

               Conread position:
               204-510
               

               Cow position:
               chr5:21459504-21459198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               221
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               110, 71
               

               Conread position:
               204-676
               

               Cow position:
               chr5:18758101-18758556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               369, 71
               

               Conread position:
               204-702
               

               Cow position:
               chr5:18543274-18543750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               404, 71
               

               Conread position:
               205-710
               

               Cow position:
               chr5:35078950-35079466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               535
               

               Alignm identity:
               358
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               139, 22
               

               Conread position:
               387-726
               

               Cow position:
               chr5:21461212-21460879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               222, 61
               

               Conread position:
               397-710
               

               Cow position:
               chr5:52660151-52660455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 34
               
Show alignments to all cow chromosomes.