Cow genome map

Conread name: Ss1.1-Pig4-TMW8054M19.5

Conread position: 220-804
Cow position: chr1:38417298-38417879 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 20

Conread position: 224-820
Cow position: chr1:32566757-32566156 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 21

Conread position: 224-820
Cow position: chr1:55275866-55275256 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 21

Conread position: 225-483
Cow position: chr1:61310386-61310650 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 74, 20

Conread position: 225-550
Cow position: chr1:89430035-89430361 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 237
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 73, 20

Conread position: 225-673
Cow position: chr1:5356291-5356754 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-714
Cow position: chr1:20525642-20526148 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-788
Cow position: chr1:4209371-4209951 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-818
Cow position: chr1:69767743-69768352 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-819
Cow position: chr1:9259648-9260259 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position: chr1:17011569-17010963 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position: chr1:17035422-17034820 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 20

Conread position: 225-820
Cow position: chr1:21088596-21089206 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position: chr1:29363466-29364070 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position: chr1:33897423-33898035 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position: chr1:40056269-40056879 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position: chr1:40683577-40682967 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position: chr1:53199708-53200319 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 20

Conread position: 225-820
Cow position: chr1:57423669-57423057 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position: chr1:67833966-67833358 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position: chr1:85792844-85793456 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position: chr1:91900189-91900797 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-823
Cow position: chr1:20830056-20830673 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 227-650
Cow position: chr1:72038398-72037975 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 282
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 72, 18

Conread position: 227-820
Cow position: chr1:24652445-24653039 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 18

Conread position: 227-820
Cow position: chr1:31364931-31364328 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 18

Conread position: 227-820
Cow position: chr1:33713236-33713856 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 18

Conread position: 228-740
Cow position: chr1:86595327-86594799 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 189

Conread position: 228-820
Cow position: chr1:89495043-89494455 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 412
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 28, 20

Conread position: 229-800
Cow position: chr1:55320912-55320329 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 257

Conread position: 229-820
Cow position: chr1:29035448-29036073 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 278

Conread position: 229-820
Cow position: chr1:79635815-79635224 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 16

Conread position: 229-820
Cow position: chr1:81288301-81288910 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 257

Conread position: 230-820
Cow position: chr1:88131944-88132551 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 15

Conread position: 231-527
Cow position: chr1:30519768-30520067 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 214
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 38, 14

Conread position: 231-820
Cow position: chr1:22619468-22618898 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 22

Conread position: 231-820
Cow position: chr1:55777752-55778361 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 14

Conread position: 231-820
Cow position: chr1:69404178-69404775 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 22

Conread position: 231-820
Cow position: chr1:73069895-73069285 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 14

Conread position: 231-820
Cow position: chr1:82922981-82922389 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 29

Conread position: 232-485
Cow position: chr1:57569138-57569402 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 63, 13

Conread position: 232-819
Cow position: chr1:33552099-33552711 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position: chr1:8826217-8826829 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position: chr1:26517715-26517114 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position: chr1:56164720-56165299 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 10

Conread position: 232-820
Cow position: chr1:62804999-62804401 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position: chr1:65387496-65388087 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position: chr1:72081948-72082531 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position: chr1:79455782-79455180 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position: chr1:82653836-82654428 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 13

Conread position: 232-820
Cow position: chr1:91891949-91891346 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position: chr1:93855689-93856287 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position: chr1:94660846-94661444 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position: chr1:99914598-99915210 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-829
Cow position: chr1:42737618-42738212 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 233-794
Cow position: chr1:40511844-40511274 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 53

Conread position: 233-820
Cow position: chr1:25551134-25551745 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 254

Conread position: 233-820
Cow position: chr1:30533849-30533247 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 252

Conread position: 233-820
Cow position: chr1:72984656-72985225 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 26

Conread position: 233-820
Cow position: chr1:102433869-102433259 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 12

Conread position: 234-438
Cow position: chr1:89769540-89769326 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 234-806
Cow position: chr1:85532189-85531604 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 26

Conread position: 235-805
Cow position: chr1:16586903-16586373 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 376
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 106, 10

Conread position: 235-822
Cow position: chr1:34693858-34694463 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 13

Conread position: 236-538
Cow position: chr1:30063540-30063838 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 9

Conread position: 236-783
Cow position: chr1:73197848-73197300 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 9

Conread position: 238-794
Cow position: chr1:58177936-58177383 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 7

Conread position: 238-821
Cow position: chr1:82477150-82477752 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 85

Conread position: 241-820
Cow position: chr1:86546957-86546362 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 81

Conread position: 242-552
Cow position: chr1:86611317-86611626 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 219
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 57, 87

Conread position: 242-617
Cow position: chr1:57972524-57972142 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 262
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 58, 46

Conread position: 242-645
Cow position: chr1:57696979-57696571 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 223

Conread position: 242-749
Cow position: chr1:32909008-32909516 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 350
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 58, 83

Conread position: 242-767
Cow position: chr1:29039222-29039755 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 87

Conread position: 242-767
Cow position: chr1:43984923-43984385 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 347
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 58, 169

Conread position: 242-786
Cow position: chr1:24206479-24205975 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 374
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 43, 86

Conread position: 242-804
Cow position: chr1:60933252-60932673 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 364
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 58, 17

Conread position: 242-818
Cow position: chr1:91597521-91596939 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 391
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 22, 17

Conread position: 242-820
Cow position: chr1:33852457-33853044 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 80

Conread position: 242-820
Cow position: chr1:46836801-46837399 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 169

Conread position: 242-820
Cow position: chr1:56724335-56724919 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 9

Conread position: 242-820
Cow position: chr1:63502995-63503565 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 84

Conread position: 242-820
Cow position: chr1:91529464-91528886 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 375
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 30, 64

Conread position: 242-821
Cow position: chr1:38419854-38420419 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 387
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 58, 17

Conread position: 242-822
Cow position: chr1:98658727-98658145 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 20

Conread position: 242-822
Cow position: chr1:102014297-102014856 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 384
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 55, 36

Conread position: 244-781
Cow position: chr1:41519578-41519078 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 36

Conread position: 245-505
Cow position: chr1:11860061-11859801 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 55, 112

Conread position: 245-726
Cow position: chr1:99018825-99018346 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 83

Conread position: 245-820
Cow position: chr1:3934074-3933485 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 214

Conread position: 245-820
Cow position: chr1:5503152-5503738 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 233

Conread position: 245-820
Cow position: chr1:39544970-39545559 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 123

Conread position: 245-820
Cow position: chr1:52358075-52357484 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 202

Conread position: 245-820
Cow position: chr1:56143151-56142568 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 80

Conread position: 245-820
Cow position: chr1:63604588-63603996 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 127

Conread position: 245-820
Cow position: chr1:80357992-80357395 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 77

Conread position: 245-826
Cow position: chr1:85779260-85778674 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 219

Conread position: 245-828
Cow position: chr1:57658072-57658677 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 240

Conread position: 246-818
Cow position: chr1:38399207-38399745 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 79

Conread position: 247-542
Cow position: chr1:44972504-44972795 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 213
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 53, 13

Conread position: 247-817
Cow position: chr1:13581801-13581225 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 126

Conread position: 247-820
Cow position: chr1:28874263-28874843 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 148

Conread position: 248-820
Cow position: chr1:49972996-49972398 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 250

Conread position: 251-676
Cow position: chr1:31359596-31360015 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 285
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 73, 54

Conread position: 251-743
Cow position: chr1:40579044-40579533 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 331
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 141, 49

Conread position: 251-818
Cow position: chr1:51965466-51966050 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 213

Conread position: 252-809
Cow position: chr1:52939293-52939850 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 362
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 48, 105

Conread position: 252-821
Cow position: chr1:7409198-7408629 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 381
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 48, 73

Conread position: 253-812
Cow position: chr1:22905965-22906516 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 76

Conread position: 253-820
Cow position: chr1:79111679-79112226 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 98

Conread position: 256-535
Cow position: chr1:58338153-58338446 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 205
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 66

Conread position: 259-820
Cow position: chr1:12061015-12060432 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 232

Conread position: 261-583
Cow position: chr1:91446662-91446971 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 227
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 40, 64

Conread position: 261-818
Cow position: chr1:51877808-51877244 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 64

Conread position: 261-818
Cow position: chr1:72185682-72185103 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 219

Conread position: 261-820
Cow position: chr1:3384744-3384164 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 40

Conread position: 261-820
Cow position: chr1:56192964-56192389 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 61

Conread position: 261-820
Cow position: chr1:68606347-68605767 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 25

Conread position: 261-821
Cow position: chr1:99315445-99315983 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 60

Conread position: 262-504
Cow position: chr1:21355244-21355003 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 181
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 33, 63

Conread position: 262-623
Cow position: chr1:82911953-82911576 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 265
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 36, 162

Conread position: 262-767
Cow position: chr1:40575411-40575922 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 60

Conread position: 262-820
Cow position: chr1:17940573-17939996 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 220

Conread position: 262-820
Cow position: chr1:81927439-81926900 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 160

Conread position: 262-820
Cow position: chr1:88387464-88387999 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 32

Conread position: 262-821
Cow position: chr1:24443162-24442584 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 152

Conread position: 268-820
Cow position: chr1:62243448-62242878 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 218

Conread position: 268-821
Cow position: chr1:18241011-18240457 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 54

Conread position: 270-799
Cow position: chr1:31417296-31416762 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 53

Conread position: 271-555
Cow position: chr1:66486931-66487217 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 191
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 26, 97

Conread position: 271-645
Cow position: chr1:18193104-18193496 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 228

Conread position: 273-723
Cow position: chr1:78923440-78923897 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 52

Conread position: 280-647
Cow position: chr1:89482049-89482418 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 255
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 19, 42

Conread position: 283-821
Cow position: chr1:53563244-53563770 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 353
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 17, 68

Conread position: 297-442
Cow position: chr1:91603658-91603516 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 77

Conread position: 297-616
Cow position: chr1:81777664-81777983 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 33, 186

Conread position: 297-676
Cow position: chr1:7141399-7141012 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 281
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 33, 95

Conread position: 297-783
Cow position: chr1:89733249-89732785 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 92

Conread position: 297-799
Cow position: chr1:55155758-55155263 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 27

Conread position: 297-820
Cow position: chr1:76620222-76619704 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 106

Conread position: 297-820
Cow position: chr1:76750726-76750197 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 132

Conread position: 298-635
Cow position: chr1:70419133-70418804 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 235
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 177, 22

Conread position: 299-707
Cow position: chr1:93235942-93236353 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 157

Conread position: 299-820
Cow position: chr1:77922948-77923483 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 183

Conread position: 308-820
Cow position: chr1:61590929-61590417 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 7

Conread position: 310-805
Cow position: chr1:16581264-16580798 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 328
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 31, 42

Conread position: 321-822
Cow position: chr1:39539674-39539217 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 337
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 67, 27

Conread position: 324-810
Cow position: chr1:81841199-81840737 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 324
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 17, 147

Conread position: 324-818
Cow position: chr1:16216194-16215717 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 44

Conread position: 325-713
Cow position: chr1:80445419-80445819 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 155

Conread position: 325-730
Cow position: chr1:82176004-82176431 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 284
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 86

Conread position: 325-745
Cow position: chr1:53364836-53365236 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 279
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 16, 64

Conread position: 325-820
Cow position: chr1:26584370-26584874 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 20

Conread position: 326-820
Cow position: chr1:34683182-34683673 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 66

Conread position: 327-560
Cow position: chr1:82929140-82928910 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 60, 99

Conread position: 329-506
Cow position: chr1:101860803-101860633 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 127, 0

Conread position: 329-691
Cow position: chr1:76703022-76702662 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 120

Conread position: 332-761
Cow position: chr1:77110798-77110378 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 289
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 14, 124

Conread position: 337-820
Cow position: chr1:67002439-67002928 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 142

Conread position: 340-818
Cow position: chr1:40748954-40748493 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 321
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 26, 132

Conread position: 340-820
Cow position: chr1:50941998-50941521 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 325
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 42, 93

Conread position: 349-820
Cow position: chr1:87969618-87970083 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 70

Conread position: 350-820
Cow position: chr1:30299666-30300129 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 313
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 38, 65

Conread position: 358-746
Cow position: chr1:51978490-51978860 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 261
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 69

Conread position: 360-714
Cow position: chr1:5319694-5320042 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 59

Conread position: 360-820
Cow position: chr1:9379211-9378743 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 97

Conread position: 360-820
Cow position: chr1:30074179-30074645 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 96

Conread position: 360-820
Cow position: chr1:59207771-59207304 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 69

Conread position: 360-820
Cow position: chr1:71561441-71560970 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 119

Conread position: 360-820
Cow position: chr1:72992808-72993262 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 50

Conread position: 360-820
Cow position: chr1:74285369-74284904 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 89

Conread position: 361-541
Cow position: chr1:29607970-29607793 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 92, 109

Conread position: 361-818
Cow position: chr1:34912279-34912746 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 111

Conread position: 362-689
Cow position: chr1:67316124-67316432 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 227
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 220, 51

Conread position: 369-820
Cow position: chr1:77462976-77463416 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 37

Conread position: 373-820
Cow position: chr1:10723899-10724354 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 106

Conread position: 373-820
Cow position: chr1:57365020-57364568 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 12

Conread position: 373-829
Cow position: chr1:81862662-81862199 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 97

Conread position: 374-794
Cow position: chr1:84223665-84224077 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 269
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 14, 32

Conread position: 375-802
Cow position: chr1:59648651-59649087 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 300
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 311

Conread position: 376-560
Cow position: chr1:45018313-45018135 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 81

Conread position: 376-801
Cow position: chr1:67326607-67326202 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 26

Conread position: 376-820
Cow position: chr1:18026434-18025970 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 324
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 38, 27

Conread position: 376-820
Cow position: chr1:67909876-67910322 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 72

Conread position: 378-527
Cow position: chr1:64697034-64697180 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 92

Conread position: 378-691
Cow position: chr1:21998091-21997770 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 244

Conread position: 378-767
Cow position: chr1:22345331-22345720 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 70

Conread position: 378-820
Cow position: chr1:39882415-39882856 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 285
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 115, 17

Conread position: 385-727
Cow position: chr1:76095727-76095385 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 242
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 177, 10

Conread position: 385-821
Cow position: chr1:40643567-40643995 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 300
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 158, 71

Conread position: 386-744
Cow position: chr1:92871257-92871626 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 239
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 65, 9

Conread position: 388-580
Cow position: chr1:91079553-91079366 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 155
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 165, 60

Conread position: 388-729
Cow position: chr1:79136289-79136617 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 225
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 286, 13

Conread position: 388-805
Cow position: chr1:72945081-72945493 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 81

Conread position: 389-820
Cow position: chr1:50210505-50210067 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 86

Conread position: 389-821
Cow position: chr1:23091992-23092408 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 289
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 289, 36

Conread position: 393-820
Cow position: chr1:29412839-29412428 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 21

Conread position: 395-807
Cow position: chr1:43570068-43569669 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 287
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 178, 60

Conread position: 396-698
Cow position: chr1:29976229-29975947 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 207
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 25

Conread position: 398-820
Cow position: chr1:82565459-82565888 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 77

Conread position: 401-767
Cow position: chr1:54407256-54406885 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 251
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 27, 54

Conread position: 401-819
Cow position: chr1:71740787-71740369 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 280
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 150, 26

Conread position: 403-781
Cow position: chr1:90607527-90607143 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 72

Conread position: 406-820
Cow position: chr1:61541650-61542050 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 38

Conread position: 409-781
Cow position: chr1:50248342-50247973 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 265
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 141, 67

Conread position: 414-820
Cow position: chr1:34507789-34508187 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 261
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 137, 38

Conread position: 414-820
Cow position: chr1:57746032-57745621 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 11

Conread position: 426-550
Cow position: chr1:84152280-84152398 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 427-819
Cow position: chr1:48248284-48248677 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 92

Conread position: 428-828
Cow position: chr1:89769161-89768759 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 23

Conread position: 434-820
Cow position: chr1:88268702-88268323 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 34

Conread position: 441-821
Cow position: chr1:82071108-82071493 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 249
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 47

Conread position: 448-793
Cow position: chr1:64481223-64480902 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 232
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 96, 21

Conread position: 456-817
Cow position: chr1:50988884-50988525 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 243
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 29, 78

Conread position: 458-796
Cow position: chr1:29226290-29226620 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 227
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 218, 9

Conread position: 458-806
Cow position: chr1:86508503-86508134 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 253
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 88, 17

Conread position: 459-819
Cow position: chr1:31812446-31812792 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 241
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 53, 16

Conread position: 459-820
Cow position: chr1:33350987-33351344 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 10

Conread position: 489-820
Cow position: chr1:82367209-82367535 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 242
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 65, 139

Conread position: 494-775
Cow position: chr1:11859319-11859033 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 65, 31

Conread position: 498-820
Cow position: chr1:1828862-1828535 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 221
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 61, 18

Conread position: 502-787
Cow position: chr1:76741784-76741493 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 52, 33

Conread position: 503-820
Cow position: chr1:72137441-72137762 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 22

Conread position: 505-820
Cow position: chr1:22725047-22724738 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 26, 50

Conread position: 509-818
Cow position: chr1:98786392-98786710 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 22, 118

Conread position: 518-820
Cow position: chr1:21592052-21592363 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 218
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 34, 118

Conread position: 532-820
Cow position: chr1:39107061-39107353 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 205
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 78, 46

Conread position: 540-820
Cow position: chr1:27112940-27112661 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 88

Conread position: 546-820
Cow position: chr1:57569327-57569605 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 22, 58

Conread position: 546-828
Cow position: chr1:51482309-51482027 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 183
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 156

Conread position: 547-820
Cow position: chr1:18964866-18964593 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 131, 17

Conread position: 547-820
Cow position: chr1:25053797-25054062 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 129, 17

Conread position: 547-820
Cow position: chr1:81777949-81778221 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 129, 17

Conread position: 547-821
Cow position: chr1:26813570-26813297 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 190
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 57, 20

Conread position: 549-814
Cow position: chr1:40436319-40436053 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 27

Conread position: 554-828
Cow position: chr1:72112515-72112789 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 14, 38

Conread position: 556-820
Cow position: chr1:29607552-29607289 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 122, 13

Conread position: 564-820
Cow position: chr1:73020410-73020160 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 172
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 89, 9

Conread position: 571-821
Cow position: chr1:85824013-85824263 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 106, 43

Conread position: 577-742
Cow position: chr1:57663516-57663680 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 65, 24

Conread position: 578-760
Cow position: chr1:65021271-65021089 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 100, 50

Conread position: 579-731
Cow position: chr1:30063910-30064064 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 593-820
Cow position: chr1:40966869-40966642 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 85, 32

Conread position: 596-818
Cow position: chr1:38386884-38386666 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 81, 31

Conread position: 606-821
Cow position: chr1:57972039-57971818 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 72, 193

Conread position: 610-820
Cow position: chr1:62921124-62921334 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 67, 15

Conread position: 611-818
Cow position: chr1:33389846-33390055 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 63, 14

Conread position: 619-808
Cow position: chr1:22844056-22844239 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 619-828
Cow position: chr1:102550078-102550278 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 6

Conread position: 624-820
Cow position: chr1:44972911-44973105 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 54, 26

Conread position: 624-820
Cow position: chr1:45003778-45003969 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 54, 109

Conread position: 624-820
Cow position: chr1:61729676-61729483 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 153, 61

Conread position: 624-821
Cow position: chr1:30520364-30520565 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 42

Conread position: 625-817
Cow position: chr1:41781474-41781287 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 37

Conread position: 625-820
Cow position: chr1:82911250-82911054 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 628-820
Cow position: chr1:58338422-58338615 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 48, 171

Conread position: 631-820
Cow position: chr1:70418543-70418354 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 47, 11

Conread position: 641-820
Cow position: chr1:57696357-57696177 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 136, 39

Conread position: 641-820
Cow position: chr1:89482545-89482723 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 75

Conread position: 644-828
Cow position: chr1:98617190-98617006 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 127
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 34, 7

Conread position: 648-820
Cow position: chr1:101012582-101012409 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 674-820
Cow position: chr1:5355307-5355161 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.