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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8054M19.5
        

               
Conread position:
               
224-788
               

               
Cow position:
               
chr11:71330421-71331004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 21
               

               
Conread position:
               
225-546
               

               
Cow position:
               
chr11:9601488-9601178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
225-692
               

               
Cow position:
               
chr11:29613168-29612684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
225-820
               

               
Cow position:
               
chr11:9733852-9733246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
225-820
               

               
Cow position:
               
chr11:17106857-17106245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
225-820
               

               
Cow position:
               
chr11:17546988-17547594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
225-820
               

               
Cow position:
               
chr11:19063246-19062640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
225-820
               

               
Cow position:
               
chr11:20733410-20732797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 20
               

               
Conread position:
               
225-820
               

               
Cow position:
               
chr11:28228940-28228331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
225-820
               

               
Cow position:
               
chr11:32452653-32453268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
225-820
               

               
Cow position:
               
chr11:44518039-44517429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 20
               

               
Conread position:
               
225-820
               

               
Cow position:
               
chr11:57627227-57626616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
225-820
               

               
Cow position:
               
chr11:61400252-61399668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
225-820
               

               
Cow position:
               
chr11:66729921-66730523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
227-528
               

               
Cow position:
               
chr11:74424424-74424729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
227-820
               

               
Cow position:
               
chr11:4026782-4026175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
228-820
               

               
Cow position:
               
chr11:1489323-1488735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 91
               

               
Conread position:
               
228-820
               

               
Cow position:
               
chr11:19101659-19101053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
228-820
               

               
Cow position:
               
chr11:26548353-26548965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 257
               

               
Conread position:
               
228-820
               

               
Cow position:
               
chr11:53286339-53285736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
228-820
               

               
Cow position:
               
chr11:67451322-67451929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 93
               

               
Conread position:
               
230-522
               

               
Cow position:
               
chr11:50042304-50042020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
230-820
               

               
Cow position:
               
chr11:9156316-9155721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 15
               

               
Conread position:
               
231-820
               

               
Cow position:
               
chr11:26070216-26069609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 16
               

               
Conread position:
               
231-820
               

               
Cow position:
               
chr11:35264708-35265292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
61, 17
               

               
Conread position:
               
231-820
               

               
Cow position:
               
chr11:38834602-38834011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 29
               

               
Conread position:
               
231-820
               

               
Cow position:
               
chr11:39804570-39805171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 20
               

               
Conread position:
               
231-820
               

               
Cow position:
               
chr11:44582502-44581906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 14
               

               
Conread position:
               
232-555
               

               
Cow position:
               
chr11:26564258-26563938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
66, 10
               

               
Conread position:
               
232-590
               

               
Cow position:
               
chr11:44252630-44252998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
232-604
               

               
Cow position:
               
chr11:4269569-4269180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
232-809
               

               
Cow position:
               
chr11:10848283-10848876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
232-818
               

               
Cow position:
               
chr11:31926997-31927590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
63, 13
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr11:12357581-12356965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr11:26124094-26123482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr11:30253068-30253660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr11:40775164-40774591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr11:41169861-41169256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr11:43513798-43513192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr11:50026916-50026311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr11:52420235-52420828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 13
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr11:53431217-53430596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr11:63654501-63653896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 13
               

               
Conread position:
               
233-672
               

               
Cow position:
               
chr11:45921776-45921321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 26
               

               
Conread position:
               
233-788
               

               
Cow position:
               
chr11:11988965-11989534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 253
               

               
Conread position:
               
236-820
               

               
Cow position:
               
chr11:42311603-42311000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 9
               

               
Conread position:
               
237-822
               

               
Cow position:
               
chr11:35254418-35253862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
61, 86
               

               
Conread position:
               
242-583
               

               
Cow position:
               
chr11:35504364-35504023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
58, 188
               

               
Conread position:
               
242-623
               

               
Cow position:
               
chr11:21899001-21898619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
31, 81
               

               
Conread position:
               
242-804
               

               
Cow position:
               
chr11:15943504-15942957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
70, 62
               

               
Conread position:
               
242-805
               

               
Cow position:
               
chr11:73134131-73134724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 80
               

               
Conread position:
               
242-820
               

               
Cow position:
               
chr11:42363591-42364152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
58, 78
               

               
Conread position:
               
242-820
               

               
Cow position:
               
chr11:47759436-47758842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 172
               

               
Conread position:
               
243-514
               

               
Cow position:
               
chr11:4056649-4056383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 70
               

               
Conread position:
               
243-683
               

               
Cow position:
               
chr11:20506071-20506533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
57, 249
               

               
Conread position:
               
243-688
               

               
Cow position:
               
chr11:20511447-20511908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
57, 249
               

               
Conread position:
               
245-464
               

               
Cow position:
               
chr11:4034501-4034277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
245-692
               

               
Cow position:
               
chr11:1495186-1494735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 143
               

               
Conread position:
               
245-753
               

               
Cow position:
               
chr11:30278438-30278958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
34, 79
               

               
Conread position:
               
245-820
               

               
Cow position:
               
chr11:85392981-85392397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 126
               

               
Conread position:
               
245-821
               

               
Cow position:
               
chr11:3493833-3494427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 241
               

               
Conread position:
               
245-821
               

               
Cow position:
               
chr11:72310189-72309602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 174
               

               
Conread position:
               
247-819
               

               
Cow position:
               
chr11:2727582-2728155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 156
               

               
Conread position:
               
248-820
               

               
Cow position:
               
chr11:23880877-23881458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 239
               

               
Conread position:
               
248-820
               

               
Cow position:
               
chr11:24394161-24394750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 205
               

               
Conread position:
               
248-820
               

               
Cow position:
               
chr11:28391817-28392402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 12
               

               
Conread position:
               
248-820
               

               
Cow position:
               
chr11:29667758-29667158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 214
               

               
Conread position:
               
248-820
               

               
Cow position:
               
chr11:67845723-67845135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 74
               

               
Conread position:
               
251-798
               

               
Cow position:
               
chr11:13065118-13064571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 67
               

               
Conread position:
               
252-820
               

               
Cow position:
               
chr11:4063022-4062476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 64
               

               
Conread position:
               
256-817
               

               
Cow position:
               
chr11:76373132-76372597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 32
               

               
Conread position:
               
256-820
               

               
Cow position:
               
chr11:58135252-58135825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 154
               

               
Conread position:
               
257-812
               

               
Cow position:
               
chr11:9204977-9204434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 14
               

               
Conread position:
               
261-633
               

               
Cow position:
               
chr11:44156389-44156013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
38, 199
               

               
Conread position:
               
262-758
               

               
Cow position:
               
chr11:21849651-21849152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
51, 165
               

               
Conread position:
               
262-784
               

               
Cow position:
               
chr11:30122981-30122452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 60
               

               
Conread position:
               
262-820
               

               
Cow position:
               
chr11:67154550-67155114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 214
               

               
Conread position:
               
262-828
               

               
Cow position:
               
chr11:75554137-75553571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 245
               

               
Conread position:
               
264-815
               

               
Cow position:
               
chr11:32685760-32686299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 73
               

               
Conread position:
               
264-818
               

               
Cow position:
               
chr11:18887716-18888254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 61
               

               
Conread position:
               
265-792
               

               
Cow position:
               
chr11:26074103-26073561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 209
               

               
Conread position:
               
268-523
               

               
Cow position:
               
chr11:10216273-10216012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 184
               

               
Conread position:
               
281-574
               

               
Cow position:
               
chr11:21928305-21928015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 109
               

               
Conread position:
               
281-828
               

               
Cow position:
               
chr11:63275519-63274972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 28
               

               
Conread position:
               
294-821
               

               
Cow position:
               
chr11:64355723-64356237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
297-567
               

               
Cow position:
               
chr11:21890088-21889830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
45, 175
               

               
Conread position:
               
297-781
               

               
Cow position:
               
chr11:3856121-3856599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 20
               

               
Conread position:
               
297-781
               

               
Cow position:
               
chr11:18070036-18069543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
297-820
               

               
Cow position:
               
chr11:87142481-87143018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 20
               

               
Conread position:
               
298-638
               

               
Cow position:
               
chr11:54216356-54216006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
44, 177
               

               
Conread position:
               
299-680
               

               
Cow position:
               
chr11:14728144-14727766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
215, 21
               

               
Conread position:
               
302-821
               

               
Cow position:
               
chr11:26784167-26784689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 157
               

               
Conread position:
               
321-690
               

               
Cow position:
               
chr11:59599626-59599992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
83, 60
               

               
Conread position:
               
324-561
               

               
Cow position:
               
chr11:31932375-31932613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
65, 97
               

               
Conread position:
               
324-798
               

               
Cow position:
               
chr11:37285533-37286007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
324-820
               

               
Cow position:
               
chr11:23126704-23126234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
24, 91
               

               
Conread position:
               
324-820
               

               
Cow position:
               
chr11:46779917-46779424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 147
               

               
Conread position:
               
324-820
               

               
Cow position:
               
chr11:49239029-49238520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 99
               

               
Conread position:
               
325-646
               

               
Cow position:
               
chr11:54484347-54484023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
22, 149
               

               
Conread position:
               
326-731
               

               
Cow position:
               
chr11:40507168-40506772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
15, 67
               

               
Conread position:
               
329-688
               

               
Cow position:
               
chr11:25865901-25865539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
330-828
               

               
Cow position:
               
chr11:7117357-7117856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
340-666
               

               
Cow position:
               
chr11:75357177-75357508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 140
               

               
Conread position:
               
349-561
               

               
Cow position:
               
chr11:15535420-15535627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
22, 16
               

               
Conread position:
               
360-514
               

               
Cow position:
               
chr11:44489637-44489487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
360-633
               

               
Cow position:
               
chr11:28053674-28053393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
19, 118
               

               
Conread position:
               
360-819
               

               
Cow position:
               
chr11:49039408-49038945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 110
               

               
Conread position:
               
361-528
               

               
Cow position:
               
chr11:21444432-21444595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
32, 97
               

               
Conread position:
               
361-617
               

               
Cow position:
               
chr11:36763910-36764180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
7, 79
               

               
Conread position:
               
361-794
               

               
Cow position:
               
chr11:50949368-50948914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
31, 139
               

               
Conread position:
               
361-820
               

               
Cow position:
               
chr11:60033247-60032801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
26, 39
               

               
Conread position:
               
364-828
               

               
Cow position:
               
chr11:23249494-23249025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 40
               

               
Conread position:
               
368-766
               

               
Cow position:
               
chr11:21011354-21010959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
44, 17
               

               
Conread position:
               
373-700
               

               
Cow position:
               
chr11:50016023-50015708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
19, 87
               

               
Conread position:
               
373-820
               

               
Cow position:
               
chr11:3261482-3261924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 86
               

               
Conread position:
               
373-820
               

               
Cow position:
               
chr11:27657416-27657874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 83
               

               
Conread position:
               
375-817
               

               
Cow position:
               
chr11:82123232-82122817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
13, 66
               

               
Conread position:
               
375-827
               

               
Cow position:
               
chr11:29231997-29231538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 20
               

               
Conread position:
               
376-567
               

               
Cow position:
               
chr11:28421106-28421288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
8, 42
               

               
Conread position:
               
376-712
               

               
Cow position:
               
chr11:9762783-9762457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 92
               

               
Conread position:
               
376-724
               

               
Cow position:
               
chr11:45653645-45653295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
12, 94
               

               
Conread position:
               
376-818
               

               
Cow position:
               
chr11:27669005-27668560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 50
               

               
Conread position:
               
376-820
               

               
Cow position:
               
chr11:64372671-64373114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
172, 19
               

               
Conread position:
               
379-820
               

               
Cow position:
               
chr11:10056497-10056936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
180, 86
               

               
Conread position:
               
383-649
               

               
Cow position:
               
chr11:65681404-65681672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
152, 12
               

               
Conread position:
               
383-828
               

               
Cow position:
               
chr11:30208129-30208582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 71
               

               
Conread position:
               
385-688
               

               
Cow position:
               
chr11:51040610-51040910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
73, 66
               

               
Conread position:
               
385-820
               

               
Cow position:
               
chr11:2833323-2833725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 82
               

               
Conread position:
               
386-820
               

               
Cow position:
               
chr11:35894906-35894469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 18
               

               
Conread position:
               
389-759
               

               
Cow position:
               
chr11:8839444-8839076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
117, 63
               

               
Conread position:
               
389-761
               

               
Cow position:
               
chr11:44231463-44231822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 264
               

               
Conread position:
               
389-820
               

               
Cow position:
               
chr11:31163697-31164114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
178, 51
               

               
Conread position:
               
395-727
               

               
Cow position:
               
chr11:40329982-40329640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
13, 69
               

               
Conread position:
               
401-635
               

               
Cow position:
               
chr11:32400964-32401201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
125, 67
               

               
Conread position:
               
408-821
               

               
Cow position:
               
chr11:21475143-21475558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 61
               

               
Conread position:
               
411-818
               

               
Cow position:
               
chr11:40581424-40581818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
148, 41
               

               
Conread position:
               
414-820
               

               
Cow position:
               
chr11:9224560-9224152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
12, 79
               

               
Conread position:
               
420-820
               

               
Cow position:
               
chr11:10883323-10883724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 47
               

               
Conread position:
               
435-804
               

               
Cow position:
               
chr11:9302399-9302018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
440-820
               

               
Cow position:
               
chr11:50836618-50836231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 35
               

               
Conread position:
               
452-723
               

               
Cow position:
               
chr11:82147701-82147436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
455-820
               

               
Cow position:
               
chr11:63163882-63163523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
217, 24
               

               
Conread position:
               
456-781
               

               
Cow position:
               
chr11:42522214-42521891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
31, 63
               

               
Conread position:
               
466-820
               

               
Cow position:
               
chr11:17281408-17281042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
91, 169
               

               
Conread position:
               
471-820
               

               
Cow position:
               
chr11:47738461-47738111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 16
               

               
Conread position:
               
480-820
               

               
Cow position:
               
chr11:17119259-17118905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
10, 156
               

               
Conread position:
               
491-714
               

               
Cow position:
               
chr11:52808456-52808683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
84, 63
               

               
Conread position:
               
498-821
               

               
Cow position:
               
chr11:25393297-25393627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
505-763
               

               
Cow position:
               
chr11:3226712-3226983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
54, 40
               

               
Conread position:
               
511-821
               

               
Cow position:
               
chr11:13048648-13048330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 92
               

               
Conread position:
               
546-821
               

               
Cow position:
               
chr11:37802227-37802500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
547-821
               

               
Cow position:
               
chr11:49552990-49552715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
14, 82
               

               
Conread position:
               
554-821
               

               
Cow position:
               
chr11:31863256-31863524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
122, 18
               

               
Conread position:
               
558-745
               

               
Cow position:
               
chr11:33976900-33976715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
118, 64
               

               
Conread position:
               
564-788
               

               
Cow position:
               
chr11:41234195-41234419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
114, 61
               

               
Conread position:
               
564-818
               

               
Cow position:
               
chr11:32079607-32079353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
114, 61
               

               
Conread position:
               
564-820
               

               
Cow position:
               
chr11:11590148-11590403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
69, 61
               

               
Conread position:
               
564-820
               

               
Cow position:
               
chr11:15986432-15986679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
114, 61
               

               
Conread position:
               
564-820
               

               
Cow position:
               
chr11:86876703-86876447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
114, 61
               

               
Conread position:
               
565-746
               

               
Cow position:
               
chr11:12372655-12372474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
112, 60
               

               
Conread position:
               
573-820
               

               
Cow position:
               
chr11:63647251-63647498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
105, 52
               

               
Conread position:
               
593-827
               

               
Cow position:
               
chr11:21889308-21889075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
88, 32
               

               
Conread position:
               
599-732
               

               
Cow position:
               
chr11:81340374-81340239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
624-805
               

               
Cow position:
               
chr11:54483751-54483570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
54, 111
               

               
Conread position:
               
624-821
               

               
Cow position:
               
chr11:44155760-44155563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 83
               

               
Conread position:
               
626-820
               

               
Cow position:
               
chr11:4268936-4268741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
630-828
               

               
Cow position:
               
chr11:39482575-39482767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
647-820
               

               
Cow position:
               
chr11:40405790-40405616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
653-820
               

               
Cow position:
               
chr11:44041976-44042144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
662-788
               

               
Cow position:
               
chr11:63976969-63977096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 64
               

               
Conread position:
               
675-822
               

               
Cow position:
               
chr11:47728400-47728253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
677-819
               

               
Cow position:
               
chr11:3086729-3086587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
684-820
               

               
Cow position:
               
chr11:78672534-78672398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
689-828
               

               
Cow position:
               
chr11:42371118-42371257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.