Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8054M19.5
        

               Conread position:
               225-488
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               72, 20
               

               Conread position:
               225-512
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               225-820
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 20
               

               Conread position:
               225-820
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               408
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               225-820
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 20
               

               Conread position:
               225-820
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               227-648
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               298
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               35, 18
               

               Conread position:
               227-692
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               318
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               72, 18
               

               Conread position:
               227-815
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 18
               

               Conread position:
               232-550
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 13
               

               Conread position:
               232-639
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               232-805
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 13
               

               Conread position:
               232-819
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 13
               

               Conread position:
               232-820
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 13
               

               Conread position:
               232-820
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 13
               

               Conread position:
               232-820
               

               Cow position:
               
               

               Alignm length:
               629
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               232-820
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               237-820
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 212
               

               Conread position:
               242-765
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 237
               

               Conread position:
               242-820
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 80
               

               Conread position:
               245-637
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               51, 14
               

               Conread position:
               245-820
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 14
               

               Conread position:
               245-820
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 241
               

               Conread position:
               248-820
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 247
               

               Conread position:
               251-812
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               374
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               49, 66
               

               Conread position:
               251-820
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 286
               

               Conread position:
               251-820
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 236
               

               Conread position:
               253-820
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               391
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               47, 72
               

               Conread position:
               255-821
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 19
               

               Conread position:
               258-730
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 17
               

               Conread position:
               259-560
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               38, 66
               

               Conread position:
               259-703
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               310
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               23, 63
               

               Conread position:
               261-786
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 218
               

               Conread position:
               263-677
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               281
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               8, 89
               

               Conread position:
               281-820
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 198
               

               Conread position:
               303-703
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               27, 63
               

               Conread position:
               304-820
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 49
               

               Conread position:
               307-781
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               314
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               316-820
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 167
               

               Conread position:
               324-645
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               29, 103
               

               Conread position:
               325-822
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 92
               

               Conread position:
               326-820
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 63
               

               Conread position:
               345-818
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 128
               

               Conread position:
               360-723
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 119
               

               Conread position:
               360-820
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               316
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               213, 25
               

               Conread position:
               372-822
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               299
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               20, 63
               

               Conread position:
               374-820
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 30
               

               Conread position:
               385-740
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               187, 10
               

               Conread position:
               395-560
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               403-820
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 72
               

               Conread position:
               420-828
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               273
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               247, 47
               

               Conread position:
               421-820
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 27
               

               Conread position:
               424-819
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               264
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               117, 51
               

               Conread position:
               427-781
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               30, 12
               

               Conread position:
               428-821
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               33, 63
               

               Conread position:
               456-812
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               94, 31
               

               Conread position:
               456-820
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               24, 34
               

               Conread position:
               473-820
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               9, 70
               

               Conread position:
               489-820
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               41, 148
               

               Conread position:
               501-820
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               509-820
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               49, 11
               

               Conread position:
               545-820
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               40, 75
               

               Conread position:
               547-820
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 17
               

               Conread position:
               555-820
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               72, 23
               

               Conread position:
               565-820
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               113, 7
               

               Conread position:
               565-820
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               43, 59
               

               Conread position:
               577-828
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               101, 46
               

               Conread position:
               588-742
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               90, 31
               

               Conread position:
               593-799
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               82, 32
               

               Conread position:
               598-828
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               80, 27
               

               Conread position:
               624-820
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               54, 102
               

               Conread position:
               625-781
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               625-820
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               53, 145
               

               Conread position:
               625-820
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               626-766
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               52, 0
               
Show alignments to all cow chromosomes.