Cow genome map

Conread name: Ss1.1-Pig4-TMW8054M19.5

Conread position: 225-549
Cow position:
Alignm length: 338
Alignm identity: 238
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 73, 20

Conread position: 225-550
Cow position:
Alignm length: 337
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-710
Cow position:
Alignm length: 509
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-745
Cow position:
Alignm length: 545
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-815
Cow position:
Alignm length: 616
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-818
Cow position:
Alignm length: 610
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 20

Conread position: 225-820
Cow position:
Alignm length: 629
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position:
Alignm length: 612
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position:
Alignm length: 620
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 20

Conread position: 225-821
Cow position:
Alignm length: 618
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 20

Conread position: 227-820
Cow position:
Alignm length: 608
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 18

Conread position: 227-820
Cow position:
Alignm length: 613
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 18

Conread position: 227-820
Cow position:
Alignm length: 624
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 95

Conread position: 228-558
Cow position:
Alignm length: 339
Alignm identity: 230
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 71, 19

Conread position: 228-820
Cow position:
Alignm length: 617
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 17

Conread position: 229-689
Cow position:
Alignm length: 496
Alignm identity: 331
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 19, 233

Conread position: 230-809
Cow position:
Alignm length: 597
Alignm identity: 390
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 70, 30

Conread position: 230-820
Cow position:
Alignm length: 624
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 15

Conread position: 231-604
Cow position:
Alignm length: 395
Alignm identity: 278
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 69, 14

Conread position: 232-589
Cow position:
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-633
Cow position:
Alignm length: 414
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 13

Conread position: 232-749
Cow position:
Alignm length: 537
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 14

Conread position: 232-756
Cow position:
Alignm length: 547
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-781
Cow position:
Alignm length: 569
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 10

Conread position: 232-820
Cow position:
Alignm length: 621
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position:
Alignm length: 614
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 13

Conread position: 232-820
Cow position:
Alignm length: 610
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 13

Conread position: 232-820
Cow position:
Alignm length: 611
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 13

Conread position: 232-820
Cow position:
Alignm length: 607
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position:
Alignm length: 609
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position:
Alignm length: 617
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position:
Alignm length: 609
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 13

Conread position: 235-820
Cow position:
Alignm length: 602
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 12

Conread position: 237-579
Cow position:
Alignm length: 350
Alignm identity: 241
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 64, 22

Conread position: 238-526
Cow position:
Alignm length: 296
Alignm identity: 202
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 66, 7

Conread position: 241-820
Cow position:
Alignm length: 603
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 219

Conread position: 242-767
Cow position:
Alignm length: 551
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 80

Conread position: 242-805
Cow position:
Alignm length: 576
Alignm identity: 363
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 41, 49

Conread position: 242-820
Cow position:
Alignm length: 594
Alignm identity: 380
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 73

Conread position: 242-821
Cow position:
Alignm length: 601
Alignm identity: 382
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 91, 58

Conread position: 245-699
Cow position:
Alignm length: 461
Alignm identity: 313
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 52, 35

Conread position: 245-731
Cow position:
Alignm length: 509
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 219

Conread position: 245-748
Cow position:
Alignm length: 525
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 239

Conread position: 245-813
Cow position:
Alignm length: 579
Alignm identity: 356
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 120

Conread position: 245-820
Cow position:
Alignm length: 592
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 234

Conread position: 247-812
Cow position:
Alignm length: 586
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 175

Conread position: 248-820
Cow position:
Alignm length: 614
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 174

Conread position: 248-820
Cow position:
Alignm length: 592
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 74

Conread position: 252-820
Cow position:
Alignm length: 584
Alignm identity: 365
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 74, 52

Conread position: 252-820
Cow position:
Alignm length: 586
Alignm identity: 378
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 20, 39

Conread position: 258-820
Cow position:
Alignm length: 585
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 227

Conread position: 258-828
Cow position:
Alignm length: 586
Alignm identity: 386
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 13, 65

Conread position: 259-820
Cow position:
Alignm length: 587
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 60

Conread position: 259-821
Cow position:
Alignm length: 583
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 63

Conread position: 261-557
Cow position:
Alignm length: 304
Alignm identity: 196
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 113

Conread position: 261-820
Cow position:
Alignm length: 579
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 63

Conread position: 262-551
Cow position:
Alignm length: 298
Alignm identity: 205
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 64

Conread position: 262-820
Cow position:
Alignm length: 573
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 194

Conread position: 262-820
Cow position:
Alignm length: 577
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 60

Conread position: 264-828
Cow position:
Alignm length: 581
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 64

Conread position: 268-703
Cow position:
Alignm length: 453
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 106

Conread position: 274-820
Cow position:
Alignm length: 566
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 24

Conread position: 297-585
Cow position:
Alignm length: 293
Alignm identity: 213
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 33, 99

Conread position: 297-735
Cow position:
Alignm length: 444
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 23

Conread position: 298-820
Cow position:
Alignm length: 542
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 19

Conread position: 299-781
Cow position:
Alignm length: 495
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 178

Conread position: 306-820
Cow position:
Alignm length: 527
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 11

Conread position: 322-820
Cow position:
Alignm length: 516
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 82

Conread position: 325-752
Cow position:
Alignm length: 448
Alignm identity: 277
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 16, 172

Conread position: 336-820
Cow position:
Alignm length: 503
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 145

Conread position: 345-822
Cow position:
Alignm length: 489
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 111

Conread position: 359-820
Cow position:
Alignm length: 473
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 39

Conread position: 360-804
Cow position:
Alignm length: 463
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 120

Conread position: 360-821
Cow position:
Alignm length: 478
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 50

Conread position: 361-676
Cow position:
Alignm length: 324
Alignm identity: 212
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 9

Conread position: 361-820
Cow position:
Alignm length: 468
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 27

Conread position: 361-821
Cow position:
Alignm length: 463
Alignm identity: 303
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 32, 80

Conread position: 365-740
Cow position:
Alignm length: 390
Alignm identity: 246
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 55

Conread position: 367-808
Cow position:
Alignm length: 447
Alignm identity: 288
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 15, 35

Conread position: 373-766
Cow position:
Alignm length: 407
Alignm identity: 270
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 77

Conread position: 374-648
Cow position:
Alignm length: 278
Alignm identity: 185
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 143, 21

Conread position: 376-820
Cow position:
Alignm length: 456
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 94

Conread position: 377-813
Cow position:
Alignm length: 447
Alignm identity: 273
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 133

Conread position: 379-721
Cow position:
Alignm length: 352
Alignm identity: 230
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 16, 91

Conread position: 395-820
Cow position:
Alignm length: 439
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 5

Conread position: 396-828
Cow position:
Alignm length: 453
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 59

Conread position: 397-820
Cow position:
Alignm length: 436
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 43

Conread position: 411-791
Cow position:
Alignm length: 397
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 58

Conread position: 419-759
Cow position:
Alignm length: 346
Alignm identity: 223
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 139, 49

Conread position: 435-676
Cow position:
Alignm length: 248
Alignm identity: 171
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 113, 34

Conread position: 436-819
Cow position:
Alignm length: 397
Alignm identity: 263
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 38, 84

Conread position: 456-823
Cow position:
Alignm length: 379
Alignm identity: 250
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 111, 13

Conread position: 456-828
Cow position:
Alignm length: 382
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 13

Conread position: 457-725
Cow position:
Alignm length: 282
Alignm identity: 192
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 20, 31

Conread position: 460-820
Cow position:
Alignm length: 367
Alignm identity: 246
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 106, 50

Conread position: 463-764
Cow position:
Alignm length: 304
Alignm identity: 195
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 113, 18

Conread position: 463-767
Cow position:
Alignm length: 306
Alignm identity: 208
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 214, 26

Conread position: 469-767
Cow position:
Alignm length: 311
Alignm identity: 211
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 81, 27

Conread position: 473-820
Cow position:
Alignm length: 358
Alignm identity: 226
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 84, 180

Conread position: 480-820
Cow position:
Alignm length: 343
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 75

Conread position: 483-820
Cow position:
Alignm length: 352
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 130

Conread position: 497-755
Cow position:
Alignm length: 261
Alignm identity: 177
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 111, 55

Conread position: 509-820
Cow position:
Alignm length: 314
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 106

Conread position: 546-822
Cow position:
Alignm length: 285
Alignm identity: 195
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 20, 80

Conread position: 547-820
Cow position:
Alignm length: 275
Alignm identity: 198
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 131, 17

Conread position: 550-820
Cow position:
Alignm length: 274
Alignm identity: 197
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 58, 19

Conread position: 565-799
Cow position:
Alignm length: 238
Alignm identity: 157
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 110, 58

Conread position: 573-794
Cow position:
Alignm length: 224
Alignm identity: 150
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 81, 52

Conread position: 574-820
Cow position:
Alignm length: 248
Alignm identity: 177
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 104, 51

Conread position: 593-820
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 84, 32

Conread position: 606-820
Cow position:
Alignm length: 216
Alignm identity: 149
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 72, 19

Conread position: 621-820
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 57, 17

Conread position: 622-821
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 54, 167

Conread position: 624-821
Cow position:
Alignm length: 199
Alignm identity: 151
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 54, 0

Conread position: 627-820
Cow position:
Alignm length: 195
Alignm identity: 139
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 51, 164

Conread position: 675-820
Cow position:
Alignm length: 146
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.