Cow genome map

Conread name: Ss1.1-Pig4-TMW8054M19.5

Conread position: 223-657
Cow position:
Alignm length: 451
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 22

Conread position: 225-731
Cow position:
Alignm length: 530
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-782
Cow position:
Alignm length: 570
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 17

Conread position: 225-799
Cow position:
Alignm length: 598
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position:
Alignm length: 619
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position:
Alignm length: 620
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position:
Alignm length: 617
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 20

Conread position: 225-820
Cow position:
Alignm length: 630
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 226-818
Cow position:
Alignm length: 609
Alignm identity: 402
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 71, 16

Conread position: 227-623
Cow position:
Alignm length: 420
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 18

Conread position: 227-731
Cow position:
Alignm length: 523
Alignm identity: 348
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 69, 18

Conread position: 227-818
Cow position:
Alignm length: 608
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 18

Conread position: 227-820
Cow position:
Alignm length: 605
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 18

Conread position: 227-828
Cow position:
Alignm length: 642
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 19

Conread position: 228-588
Cow position:
Alignm length: 374
Alignm identity: 250
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 72, 140

Conread position: 228-820
Cow position:
Alignm length: 615
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 17

Conread position: 228-820
Cow position:
Alignm length: 626
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 33

Conread position: 231-471
Cow position:
Alignm length: 251
Alignm identity: 173
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 69, 11

Conread position: 231-471
Cow position:
Alignm length: 252
Alignm identity: 176
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 68, 16

Conread position: 231-820
Cow position:
Alignm length: 611
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 16

Conread position: 232-488
Cow position:
Alignm length: 269
Alignm identity: 183
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 68, 13

Conread position: 232-505
Cow position:
Alignm length: 284
Alignm identity: 203
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 68, 28

Conread position: 232-537
Cow position:
Alignm length: 317
Alignm identity: 221
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 21, 13

Conread position: 232-820
Cow position:
Alignm length: 611
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 92

Conread position: 232-820
Cow position:
Alignm length: 638
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 13

Conread position: 232-820
Cow position:
Alignm length: 612
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position:
Alignm length: 613
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 13

Conread position: 232-820
Cow position:
Alignm length: 617
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position:
Alignm length: 623
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position:
Alignm length: 607
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 233-589
Cow position:
Alignm length: 379
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 12

Conread position: 233-702
Cow position:
Alignm length: 497
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 213

Conread position: 233-820
Cow position:
Alignm length: 606
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 14

Conread position: 234-820
Cow position:
Alignm length: 604
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 167

Conread position: 235-820
Cow position:
Alignm length: 605
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 87

Conread position: 236-640
Cow position:
Alignm length: 421
Alignm identity: 284
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 64, 11

Conread position: 236-820
Cow position:
Alignm length: 598
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 12

Conread position: 237-658
Cow position:
Alignm length: 444
Alignm identity: 282
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 52, 43

Conread position: 237-749
Cow position:
Alignm length: 532
Alignm identity: 347
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 60, 88

Conread position: 238-821
Cow position:
Alignm length: 599
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 80

Conread position: 241-677
Cow position:
Alignm length: 462
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 20

Conread position: 242-561
Cow position:
Alignm length: 330
Alignm identity: 227
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 55, 79

Conread position: 242-587
Cow position:
Alignm length: 360
Alignm identity: 247
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 56, 157

Conread position: 242-617
Cow position:
Alignm length: 388
Alignm identity: 264
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 55, 150

Conread position: 242-636
Cow position:
Alignm length: 407
Alignm identity: 200
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 55, 79

Conread position: 242-800
Cow position:
Alignm length: 584
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 245

Conread position: 242-805
Cow position:
Alignm length: 580
Alignm identity: 360
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 298, 113

Conread position: 242-820
Cow position:
Alignm length: 603
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 80

Conread position: 242-820
Cow position:
Alignm length: 601
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 17

Conread position: 245-509
Cow position:
Alignm length: 270
Alignm identity: 193
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 57, 80

Conread position: 245-647
Cow position:
Alignm length: 424
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 80

Conread position: 245-692
Cow position:
Alignm length: 469
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 15

Conread position: 245-819
Cow position:
Alignm length: 595
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 239

Conread position: 245-828
Cow position:
Alignm length: 604
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 18

Conread position: 248-659
Cow position:
Alignm length: 433
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 19

Conread position: 248-663
Cow position:
Alignm length: 446
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 238

Conread position: 248-720
Cow position:
Alignm length: 483
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 119

Conread position: 248-809
Cow position:
Alignm length: 578
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 74

Conread position: 248-818
Cow position:
Alignm length: 598
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 77

Conread position: 248-820
Cow position:
Alignm length: 585
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 11

Conread position: 248-820
Cow position:
Alignm length: 595
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 32

Conread position: 248-821
Cow position:
Alignm length: 605
Alignm identity: 391
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 23, 11

Conread position: 251-568
Cow position:
Alignm length: 328
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 78

Conread position: 251-764
Cow position:
Alignm length: 548
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 74

Conread position: 251-820
Cow position:
Alignm length: 588
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 157

Conread position: 251-820
Cow position:
Alignm length: 603
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 245

Conread position: 251-820
Cow position:
Alignm length: 591
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 234

Conread position: 251-822
Cow position:
Alignm length: 582
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 212

Conread position: 252-716
Cow position:
Alignm length: 490
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 70

Conread position: 252-809
Cow position:
Alignm length: 568
Alignm identity: 352
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 109

Conread position: 254-820
Cow position:
Alignm length: 586
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 175

Conread position: 255-832
Cow position:
Alignm length: 588
Alignm identity: 306
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 131, 202

Conread position: 261-778
Cow position:
Alignm length: 527
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 48

Conread position: 261-820
Cow position:
Alignm length: 580
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 59

Conread position: 262-555
Cow position:
Alignm length: 299
Alignm identity: 217
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 68, 40

Conread position: 262-752
Cow position:
Alignm length: 506
Alignm identity: 339
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 8, 41

Conread position: 262-805
Cow position:
Alignm length: 565
Alignm identity: 357
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 35, 134

Conread position: 262-820
Cow position:
Alignm length: 568
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 144

Conread position: 262-820
Cow position:
Alignm length: 582
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 60

Conread position: 263-809
Cow position:
Alignm length: 575
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 178

Conread position: 263-820
Cow position:
Alignm length: 571
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 62

Conread position: 271-676
Cow position:
Alignm length: 428
Alignm identity: 295
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 28, 138

Conread position: 281-820
Cow position:
Alignm length: 572
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 207

Conread position: 282-684
Cow position:
Alignm length: 416
Alignm identity: 273
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 106, 63

Conread position: 297-781
Cow position:
Alignm length: 492
Alignm identity: 323
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 33, 175

Conread position: 297-809
Cow position:
Alignm length: 535
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 178

Conread position: 298-805
Cow position:
Alignm length: 519
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 19

Conread position: 299-686
Cow position:
Alignm length: 393
Alignm identity: 266
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 30, 20

Conread position: 303-820
Cow position:
Alignm length: 524
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 169

Conread position: 313-781
Cow position:
Alignm length: 477
Alignm identity: 322
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 47, 136

Conread position: 322-656
Cow position:
Alignm length: 341
Alignm identity: 237
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 19, 109

Conread position: 323-713
Cow position:
Alignm length: 396
Alignm identity: 248
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 22

Conread position: 325-820
Cow position:
Alignm length: 513
Alignm identity: 329
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 38

Conread position: 325-820
Cow position:
Alignm length: 514
Alignm identity: 343
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 37, 70

Conread position: 329-550
Cow position:
Alignm length: 224
Alignm identity: 166
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 12, 94

Conread position: 346-574
Cow position:
Alignm length: 231
Alignm identity: 172
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 50, 130

Conread position: 346-820
Cow position:
Alignm length: 486
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 130

Conread position: 360-597
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 28, 119

Conread position: 360-635
Cow position:
Alignm length: 289
Alignm identity: 199
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 28, 46

Conread position: 360-741
Cow position:
Alignm length: 387
Alignm identity: 260
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 36, 81

Conread position: 361-523
Cow position:
Alignm length: 165
Alignm identity: 127
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 21, 44

Conread position: 367-820
Cow position:
Alignm length: 468
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 107

Conread position: 373-678
Cow position:
Alignm length: 312
Alignm identity: 216
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 96, 117

Conread position: 373-750
Cow position:
Alignm length: 391
Alignm identity: 256
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 161, 31

Conread position: 373-820
Cow position:
Alignm length: 464
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 87

Conread position: 376-822
Cow position:
Alignm length: 455
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 50

Conread position: 377-819
Cow position:
Alignm length: 450
Alignm identity: 293
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 164, 41

Conread position: 380-731
Cow position:
Alignm length: 353
Alignm identity: 238
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 297, 73

Conread position: 385-820
Cow position:
Alignm length: 439
Alignm identity: 278
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 191, 67

Conread position: 388-820
Cow position:
Alignm length: 445
Alignm identity: 221
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 169, 248

Conread position: 395-761
Cow position:
Alignm length: 372
Alignm identity: 254
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 27, 75

Conread position: 401-822
Cow position:
Alignm length: 439
Alignm identity: 295
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 120, 66

Conread position: 404-728
Cow position:
Alignm length: 344
Alignm identity: 242
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 141, 52

Conread position: 405-820
Cow position:
Alignm length: 428
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 70

Conread position: 408-820
Cow position:
Alignm length: 414
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 61

Conread position: 410-821
Cow position:
Alignm length: 422
Alignm identity: 277
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 111, 42

Conread position: 414-820
Cow position:
Alignm length: 413
Alignm identity: 273
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 40, 215

Conread position: 440-767
Cow position:
Alignm length: 340
Alignm identity: 240
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 22, 37

Conread position: 445-818
Cow position:
Alignm length: 377
Alignm identity: 249
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 68, 7

Conread position: 456-749
Cow position:
Alignm length: 308
Alignm identity: 207
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 94, 21

Conread position: 456-820
Cow position:
Alignm length: 374
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 177

Conread position: 473-820
Cow position:
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 16

Conread position: 478-820
Cow position:
Alignm length: 355
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 156

Conread position: 484-820
Cow position:
Alignm length: 344
Alignm identity: 204
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 86, 118

Conread position: 489-819
Cow position:
Alignm length: 343
Alignm identity: 235
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 73, 150

Conread position: 499-820
Cow position:
Alignm length: 332
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 131

Conread position: 516-820
Cow position:
Alignm length: 307
Alignm identity: 204
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 69, 36

Conread position: 545-820
Cow position:
Alignm length: 279
Alignm identity: 186
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 81

Conread position: 552-820
Cow position:
Alignm length: 271
Alignm identity: 161
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 126, 8

Conread position: 565-767
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 112, 29

Conread position: 570-820
Cow position:
Alignm length: 257
Alignm identity: 186
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 38, 63

Conread position: 573-820
Cow position:
Alignm length: 250
Alignm identity: 173
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 35, 42

Conread position: 578-820
Cow position:
Alignm length: 248
Alignm identity: 180
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 100, 52

Conread position: 593-820
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 614-755
Cow position:
Alignm length: 144
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 11

Conread position: 618-781
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 624-822
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 50, 77

Conread position: 627-820
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 51, 143

Conread position: 628-820
Cow position:
Alignm length: 194
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 628-820
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 124

Conread position: 636-820
Cow position:
Alignm length: 186
Alignm identity: 144
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 42, 160

Conread position: 640-820
Cow position:
Alignm length: 182
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 58

Conread position: 645-828
Cow position:
Alignm length: 185
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 110

Conread position: 657-828
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 16, 99

Conread position: 659-820
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 19, 67

Show alignments to all cow chromosomes.