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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8054M19.5
        

               
Conread position:
               
175-808
               

               
Cow position:
               
chr15:21948434-21947798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 166
               

               
Conread position:
               
221-809
               

               
Cow position:
               
chr15:329094-329699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 268
               

               
Conread position:
               
224-828
               

               
Cow position:
               
chr15:8100238-8100836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 21
               

               
Conread position:
               
225-528
               

               
Cow position:
               
chr15:445385-445690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
72, 20
               

               
Conread position:
               
225-752
               

               
Cow position:
               
chr15:1773269-1773809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
225-781
               

               
Cow position:
               
chr15:3009072-3008506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 20
               

               
Conread position:
               
225-820
               

               
Cow position:
               
chr15:2646884-2646276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
225-820
               

               
Cow position:
               
chr15:4197233-4197844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
225-820
               

               
Cow position:
               
chr15:50123163-50122561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
225-820
               

               
Cow position:
               
chr15:53409686-53410284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 17
               

               
Conread position:
               
227-598
               

               
Cow position:
               
chr15:38981500-38981888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
227-820
               

               
Cow position:
               
chr15:4922918-4923522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 18
               

               
Conread position:
               
227-820
               

               
Cow position:
               
chr15:5981122-5981734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
227-820
               

               
Cow position:
               
chr15:14581590-14580982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
227-820
               

               
Cow position:
               
chr15:35646904-35646306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
227-828
               

               
Cow position:
               
chr15:2926081-2926676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
228-620
               

               
Cow position:
               
chr15:1783009-1783406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
70, 94
               

               
Conread position:
               
228-820
               

               
Cow position:
               
chr15:2588680-2588070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 144
               

               
Conread position:
               
228-820
               

               
Cow position:
               
chr15:32711997-32712614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 94
               

               
Conread position:
               
229-589
               

               
Cow position:
               
chr15:7235022-7235395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
229-820
               

               
Cow position:
               
chr15:6155168-6154550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 32
               

               
Conread position:
               
230-538
               

               
Cow position:
               
chr15:4950841-4951146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
25, 57
               

               
Conread position:
               
231-805
               

               
Cow position:
               
chr15:8751181-8751756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 31
               

               
Conread position:
               
231-820
               

               
Cow position:
               
chr15:580207-580792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 14
               

               
Conread position:
               
231-820
               

               
Cow position:
               
chr15:4962413-4962991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 16
               

               
Conread position:
               
232-755
               

               
Cow position:
               
chr15:50147853-50148398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 13
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr15:2077436-2078026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 13
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr15:18332050-18331456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 13
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr15:21664965-21664365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr15:24295863-24296464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr15:35752541-35751928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 13
               

               
Conread position:
               
233-784
               

               
Cow position:
               
chr15:7261386-7261941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 26
               

               
Conread position:
               
233-820
               

               
Cow position:
               
chr15:9430717-9431314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
49, 29
               

               
Conread position:
               
234-820
               

               
Cow position:
               
chr15:7838040-7838646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 254
               

               
Conread position:
               
234-820
               

               
Cow position:
               
chr15:17293826-17294426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 173
               

               
Conread position:
               
234-828
               

               
Cow position:
               
chr15:4672218-4672818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 11
               

               
Conread position:
               
235-820
               

               
Cow position:
               
chr15:3260539-3259944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 10
               

               
Conread position:
               
235-828
               

               
Cow position:
               
chr15:1299777-1299145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 7
               

               
Conread position:
               
242-444
               

               
Cow position:
               
chr15:2674861-2674649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
44, 17
               

               
Conread position:
               
242-589
               

               
Cow position:
               
chr15:51715701-51716052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
67, 141
               

               
Conread position:
               
242-599
               

               
Cow position:
               
chr15:20750177-20750547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
55, 245
               

               
Conread position:
               
242-629
               

               
Cow position:
               
chr15:6067391-6067007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
45, 83
               

               
Conread position:
               
242-787
               

               
Cow position:
               
chr15:4679045-4679621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 78
               

               
Conread position:
               
242-788
               

               
Cow position:
               
chr15:51675503-51676067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 80
               

               
Conread position:
               
242-819
               

               
Cow position:
               
chr15:5010850-5010256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 81
               

               
Conread position:
               
242-820
               

               
Cow position:
               
chr15:17148909-17149488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 205
               

               
Conread position:
               
242-820
               

               
Cow position:
               
chr15:20355816-20355221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 36
               

               
Conread position:
               
242-820
               

               
Cow position:
               
chr15:48284478-48285079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
80, 382
               

               
Conread position:
               
243-701
               

               
Cow position:
               
chr15:6485368-6485837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 79
               

               
Conread position:
               
243-820
               

               
Cow position:
               
chr15:15346325-15345731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 237
               

               
Conread position:
               
245-556
               

               
Cow position:
               
chr15:31860429-31860106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
55, 162
               

               
Conread position:
               
245-590
               

               
Cow position:
               
chr15:41357959-41358297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
23, 81
               

               
Conread position:
               
245-723
               

               
Cow position:
               
chr15:16346182-16345720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 78
               

               
Conread position:
               
245-766
               

               
Cow position:
               
chr15:6079542-6080066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 214
               

               
Conread position:
               
245-778
               

               
Cow position:
               
chr15:42530701-42531252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 242
               

               
Conread position:
               
245-805
               

               
Cow position:
               
chr15:2013349-2013923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 148
               

               
Conread position:
               
245-818
               

               
Cow position:
               
chr15:6383383-6382786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 343
               

               
Conread position:
               
245-819
               

               
Cow position:
               
chr15:18577502-18578091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 241
               

               
Conread position:
               
245-820
               

               
Cow position:
               
chr15:4927163-4927758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 50
               

               
Conread position:
               
245-820
               

               
Cow position:
               
chr15:9912440-9911859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 77
               

               
Conread position:
               
245-820
               

               
Cow position:
               
chr15:19737265-19736678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 14
               

               
Conread position:
               
245-820
               

               
Cow position:
               
chr15:32493085-32492506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 237
               

               
Conread position:
               
245-828
               

               
Cow position:
               
chr15:35736582-35737180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 77
               

               
Conread position:
               
248-628
               

               
Cow position:
               
chr15:6553029-6552631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 239
               

               
Conread position:
               
248-820
               

               
Cow position:
               
chr15:4813393-4813967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 32
               

               
Conread position:
               
248-820
               

               
Cow position:
               
chr15:24794615-24795195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 75
               

               
Conread position:
               
251-820
               

               
Cow position:
               
chr15:28489350-28488777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 148
               

               
Conread position:
               
253-819
               

               
Cow position:
               
chr15:8058757-8059344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 71
               

               
Conread position:
               
254-820
               

               
Cow position:
               
chr15:21450481-21451072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 66
               

               
Conread position:
               
256-820
               

               
Cow position:
               
chr15:4386553-4387134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 173
               

               
Conread position:
               
257-751
               

               
Cow position:
               
chr15:7892529-7892039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 65
               

               
Conread position:
               
259-700
               

               
Cow position:
               
chr15:611497-611044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
39, 63
               

               
Conread position:
               
259-765
               

               
Cow position:
               
chr15:7550946-7551465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
23, 15
               

               
Conread position:
               
260-580
               

               
Cow position:
               
chr15:50056834-50057158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
40, 186
               

               
Conread position:
               
261-818
               

               
Cow position:
               
chr15:11293629-11293069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 176
               

               
Conread position:
               
261-820
               

               
Cow position:
               
chr15:17217320-17216776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 16
               

               
Conread position:
               
261-820
               

               
Cow position:
               
chr15:31359677-31360241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 218
               

               
Conread position:
               
261-828
               

               
Cow position:
               
chr15:2763608-2764181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
37, 179
               

               
Conread position:
               
262-820
               

               
Cow position:
               
chr15:4823274-4823809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 87
               

               
Conread position:
               
263-820
               

               
Cow position:
               
chr15:3182258-3181689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 196
               

               
Conread position:
               
264-574
               

               
Cow position:
               
chr15:6367993-6367666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
32, 22
               

               
Conread position:
               
282-799
               

               
Cow position:
               
chr15:4652200-4652726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 40
               

               
Conread position:
               
294-820
               

               
Cow position:
               
chr15:4686570-4687107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 23
               

               
Conread position:
               
297-558
               

               
Cow position:
               
chr15:7545691-7545956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
33, 178
               

               
Conread position:
               
297-567
               

               
Cow position:
               
chr15:7938294-7938561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 155
               

               
Conread position:
               
297-758
               

               
Cow position:
               
chr15:1851590-1851152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
267, 20
               

               
Conread position:
               
297-813
               

               
Cow position:
               
chr15:24718187-24718694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 23
               

               
Conread position:
               
297-820
               

               
Cow position:
               
chr15:58502-59029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
297-820
               

               
Cow position:
               
chr15:2901419-2900883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 183
               

               
Conread position:
               
297-820
               

               
Cow position:
               
chr15:4766030-4766570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 141
               

               
Conread position:
               
297-820
               

               
Cow position:
               
chr15:25654227-25653683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 180
               

               
Conread position:
               
297-820
               

               
Cow position:
               
chr15:53299317-53299837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 20
               

               
Conread position:
               
297-821
               

               
Cow position:
               
chr15:16287101-16286570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 163
               

               
Conread position:
               
298-820
               

               
Cow position:
               
chr15:7563839-7564375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
298-820
               

               
Cow position:
               
chr15:18266929-18266388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 19
               

               
Conread position:
               
299-755
               

               
Cow position:
               
chr15:32479750-32479284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
55, 18
               

               
Conread position:
               
303-767
               

               
Cow position:
               
chr15:7330875-7330421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
50, 16
               

               
Conread position:
               
303-805
               

               
Cow position:
               
chr15:7965107-7964586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 17
               

               
Conread position:
               
308-820
               

               
Cow position:
               
chr15:20411452-20411973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 152
               

               
Conread position:
               
323-747
               

               
Cow position:
               
chr15:1238558-1238989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
69, 25
               

               
Conread position:
               
324-565
               

               
Cow position:
               
chr15:50253703-50253943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
63, 43
               

               
Conread position:
               
324-820
               

               
Cow position:
               
chr15:5952274-5951808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
324-820
               

               
Cow position:
               
chr15:21914869-21915379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 145
               

               
Conread position:
               
324-821
               

               
Cow position:
               
chr15:9003335-9002844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 134
               

               
Conread position:
               
324-828
               

               
Cow position:
               
chr15:4726078-4726587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 155
               

               
Conread position:
               
324-828
               

               
Cow position:
               
chr15:25106324-25105814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
54, 150
               

               
Conread position:
               
325-805
               

               
Cow position:
               
chr15:34366805-34366325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
21, 69
               

               
Conread position:
               
325-820
               

               
Cow position:
               
chr15:2412567-2412082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 20
               

               
Conread position:
               
326-746
               

               
Cow position:
               
chr15:33642966-33642531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
327-806
               

               
Cow position:
               
chr15:1318310-1318781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
33, 75
               

               
Conread position:
               
330-807
               

               
Cow position:
               
chr15:4108429-4107944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
61, 31
               

               
Conread position:
               
334-813
               

               
Cow position:
               
chr15:36668609-36669070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
33, 12
               

               
Conread position:
               
360-820
               

               
Cow position:
               
chr15:6591209-6590738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 121
               

               
Conread position:
               
360-820
               

               
Cow position:
               
chr15:17036756-17036280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 124
               

               
Conread position:
               
361-539
               

               
Cow position:
               
chr15:13390929-13390757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
29, 77
               

               
Conread position:
               
363-804
               

               
Cow position:
               
chr15:6479308-6479741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
29, 87
               

               
Conread position:
               
365-661
               

               
Cow position:
               
chr15:40386813-40387105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 37
               

               
Conread position:
               
365-820
               

               
Cow position:
               
chr15:1765237-1765693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 111
               

               
Conread position:
               
366-820
               

               
Cow position:
               
chr15:51218642-51219101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 28
               

               
Conread position:
               
367-755
               

               
Cow position:
               
chr15:44071519-44071910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 28
               

               
Conread position:
               
367-794
               

               
Cow position:
               
chr15:33797593-33797167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 28
               

               
Conread position:
               
372-818
               

               
Cow position:
               
chr15:32067684-32067234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 45
               

               
Conread position:
               
373-695
               

               
Cow position:
               
chr15:22240064-22239738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
166, 71
               

               
Conread position:
               
374-821
               

               
Cow position:
               
chr15:53313653-53314076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
376-638
               

               
Cow position:
               
chr15:6625943-6626199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
172, 58
               

               
Conread position:
               
376-784
               

               
Cow position:
               
chr15:26156766-26157162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 65
               

               
Conread position:
               
377-676
               

               
Cow position:
               
chr15:32515155-32514870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
182, 8
               

               
Conread position:
               
378-730
               

               
Cow position:
               
chr15:20361158-20360806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 22
               

               
Conread position:
               
379-821
               

               
Cow position:
               
chr15:3777745-3777311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
42, 31
               

               
Conread position:
               
385-574
               

               
Cow position:
               
chr15:12027113-12027300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
172, 81
               

               
Conread position:
               
385-781
               

               
Cow position:
               
chr15:11626600-11626993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 84
               

               
Conread position:
               
389-820
               

               
Cow position:
               
chr15:13074958-13075373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
161, 36
               

               
Conread position:
               
390-556
               

               
Cow position:
               
chr15:24216934-24216771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
401-649
               

               
Cow position:
               
chr15:523869-523615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
158, 20
               

               
Conread position:
               
406-798
               

               
Cow position:
               
chr15:24288511-24288120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 34
               

               
Conread position:
               
406-820
               

               
Cow position:
               
chr15:33122334-33122755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 69
               

               
Conread position:
               
409-806
               

               
Cow position:
               
chr15:44302136-44301743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 31
               

               
Conread position:
               
409-828
               

               
Cow position:
               
chr15:53339183-53339608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 58
               

               
Conread position:
               
410-820
               

               
Cow position:
               
chr15:38651148-38651571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
8, 43
               

               
Conread position:
               
416-731
               

               
Cow position:
               
chr15:22529784-22529469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
23, 54
               

               
Conread position:
               
419-820
               

               
Cow position:
               
chr15:3889896-3890281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 33
               

               
Conread position:
               
421-800
               

               
Cow position:
               
chr15:4141763-4141380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 54
               

               
Conread position:
               
423-821
               

               
Cow position:
               
chr15:7929552-7929947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 33
               

               
Conread position:
               
431-819
               

               
Cow position:
               
chr15:41956802-41957183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
101, 24
               

               
Conread position:
               
432-820
               

               
Cow position:
               
chr15:31783928-31783549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
23, 7
               

               
Conread position:
               
432-820
               

               
Cow position:
               
chr15:31846435-31846822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
118, 30
               

               
Conread position:
               
436-820
               

               
Cow position:
               
chr15:35898790-35898399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 39
               

               
Conread position:
               
437-818
               

               
Cow position:
               
chr15:6279470-6279849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
440-820
               

               
Cow position:
               
chr15:106991-107378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 35
               

               
Conread position:
               
440-820
               

               
Cow position:
               
chr15:17077572-17077187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 35
               

               
Conread position:
               
442-788
               

               
Cow position:
               
chr15:32340344-32340015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 28
               

               
Conread position:
               
445-820
               

               
Cow position:
               
chr15:48007355-48007735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
448-695
               

               
Cow position:
               
chr15:29343232-29342974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 41
               

               
Conread position:
               
448-820
               

               
Cow position:
               
chr15:51613121-51613514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
11, 22
               

               
Conread position:
               
455-692
               

               
Cow position:
               
chr15:8410113-8410346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
115, 14
               

               
Conread position:
               
457-820
               

               
Cow position:
               
chr15:1767848-1768205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
17, 41
               

               
Conread position:
               
462-798
               

               
Cow position:
               
chr15:29333782-29333447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
97, 19
               

               
Conread position:
               
466-781
               

               
Cow position:
               
chr15:500186-500509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
97, 50
               

               
Conread position:
               
471-820
               

               
Cow position:
               
chr15:6561606-6561964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 16
               

               
Conread position:
               
471-820
               

               
Cow position:
               
chr15:41659187-41659545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 16
               

               
Conread position:
               
471-821
               

               
Cow position:
               
chr15:32719641-32719302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
83, 18
               

               
Conread position:
               
480-696
               

               
Cow position:
               
chr15:12419912-12419691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
10, 152
               

               
Conread position:
               
480-820
               

               
Cow position:
               
chr15:25205978-25205629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 124
               

               
Conread position:
               
481-722
               

               
Cow position:
               
chr15:7783403-7783166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
486-820
               

               
Cow position:
               
chr15:46553612-46553270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
43, 133
               

               
Conread position:
               
494-820
               

               
Cow position:
               
chr15:1833598-1833262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 142
               

               
Conread position:
               
502-692
               

               
Cow position:
               
chr15:1830535-1830338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 118
               

               
Conread position:
               
513-831
               

               
Cow position:
               
chr15:6114650-6114976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
46, 195
               

               
Conread position:
               
522-820
               

               
Cow position:
               
chr15:6613790-6614098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
30, 114
               

               
Conread position:
               
525-818
               

               
Cow position:
               
chr15:41219938-41219650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
153, 20
               

               
Conread position:
               
541-820
               

               
Cow position:
               
chr15:7235427-7235703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
137, 22
               

               
Conread position:
               
546-820
               

               
Cow position:
               
chr15:13390218-13389947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 73
               

               
Conread position:
               
546-821
               

               
Cow position:
               
chr15:9737821-9737548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
132, 78
               

               
Conread position:
               
547-747
               

               
Cow position:
               
chr15:1879139-1878943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
129, 29
               

               
Conread position:
               
547-800
               

               
Cow position:
               
chr15:50869442-50869695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
109, 29
               

               
Conread position:
               
547-828
               

               
Cow position:
               
chr15:7545971-7546258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
61, 16
               

               
Conread position:
               
551-828
               

               
Cow position:
               
chr15:7939548-7939821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
127, 17
               

               
Conread position:
               
559-820
               

               
Cow position:
               
chr15:36624734-36624480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
565-820
               

               
Cow position:
               
chr15:368525-368276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
113, 60
               

               
Conread position:
               
571-818
               

               
Cow position:
               
chr15:10478397-10478151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
186, 57
               

               
Conread position:
               
610-819
               

               
Cow position:
               
chr15:14576140-14575919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
619-781
               

               
Cow position:
               
chr15:17122045-17122207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
54, 6
               

               
Conread position:
               
624-820
               

               
Cow position:
               
chr15:8698750-8698557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 15
               

               
Conread position:
               
627-819
               

               
Cow position:
               
chr15:6552598-6552404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
49, 74
               

               
Conread position:
               
633-773
               

               
Cow position:
               
chr15:24041238-24041373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 90
               

               
Conread position:
               
641-828
               

               
Cow position:
               
chr15:31859759-31859571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
645-820
               

               
Cow position:
               
chr15:4081034-4080858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
646-818
               

               
Cow position:
               
chr15:1783533-1783706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
32, 0
               
Show alignments to all cow chromosomes.