Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8054M19.5 |
| Conread position: | 224-560 |
| Cow position: | chr16:15477268-15477606 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 30, 39 |
| Conread position: | 225-550 |
| Cow position: | chr16:11284019-11284350 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 225-550 |
| Cow position: | chr16:21186042-21186373 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 225-590 |
| Cow position: | chr16:25189075-25189436 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 263 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 225-819 |
| Cow position: | chr16:27593934-27594541 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 225-820 |
| Cow position: | chr16:3088774-3088169 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 20 |
| Conread position: | 225-820 |
| Cow position: | chr16:25342385-25343006 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 20 |
| Conread position: | 225-820 |
| Cow position: | chr16:28196818-28196206 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 20 |
| Conread position: | 227-446 |
| Cow position: | chr16:42735962-42735745 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 72, 19 |
| Conread position: | 227-767 |
| Cow position: | chr16:25001870-25001312 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 18 |
| Conread position: | 227-784 |
| Cow position: | chr16:2482707-2482137 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 18 |
| Conread position: | 227-820 |
| Cow position: | chr16:1432620-1433219 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 19 |
| Conread position: | 227-820 |
| Cow position: | chr16:25086046-25086646 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 18 |
| Conread position: | 228-819 |
| Cow position: | chr16:51084583-51085191 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 19 |
| Conread position: | 228-820 |
| Cow position: | chr16:34530732-34531322 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 173 |
| Conread position: | 228-821 |
| Cow position: | chr16:10375170-10374566 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 94 |
| Conread position: | 229-734 |
| Cow position: | chr16:49255798-49255284 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 92 |
| Conread position: | 229-820 |
| Cow position: | chr16:18497868-18497281 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 90 |
| Conread position: | 229-828 |
| Cow position: | chr16:16270704-16270094 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 22 |
| Conread position: | 231-687 |
| Cow position: | chr16:41166212-41165768 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 319 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 70, 14 |
| Conread position: | 231-820 |
| Cow position: | chr16:26978573-26979140 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 20 |
| Conread position: | 231-828 |
| Cow position: | chr16:20202428-20203018 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 14 |
| Conread position: | 232-588 |
| Cow position: | chr16:3828839-3828495 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 250 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 65, 96 |
| Conread position: | 232-633 |
| Cow position: | chr16:23252003-23251577 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-663 |
| Cow position: | chr16:4478536-4478087 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-687 |
| Cow position: | chr16:406605-406134 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 13 |
| Conread position: | 232-820 |
| Cow position: | chr16:1567018-1566429 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-820 |
| Cow position: | chr16:7676023-7675423 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-820 |
| Cow position: | chr16:8815670-8815073 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-820 |
| Cow position: | chr16:10438686-10439293 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-820 |
| Cow position: | chr16:14665375-14664778 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 13 |
| Conread position: | 232-820 |
| Cow position: | chr16:15185506-15186113 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-820 |
| Cow position: | chr16:23535456-23534866 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-820 |
| Cow position: | chr16:23983730-23984337 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-820 |
| Cow position: | chr16:25442065-25442664 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-820 |
| Cow position: | chr16:25457040-25456446 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-820 |
| Cow position: | chr16:26664187-26664761 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 13 |
| Conread position: | 232-820 |
| Cow position: | chr16:27732946-27732347 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 13 |
| Conread position: | 232-820 |
| Cow position: | chr16:29047457-29048057 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-820 |
| Cow position: | chr16:40295740-40295132 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-820 |
| Cow position: | chr16:43896840-43896227 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-820 |
| Cow position: | chr16:54324901-54324294 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 13 |
| Conread position: | 233-820 |
| Cow position: | chr16:5485165-5485758 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 174 |
| Conread position: | 233-820 |
| Cow position: | chr16:5890431-5891031 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 229 |
| Conread position: | 235-558 |
| Cow position: | chr16:28169916-28169583 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 237 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 63, 10 |
| Conread position: | 236-479 |
| Cow position: | chr16:42185056-42184808 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 32, 9 |
| Conread position: | 236-560 |
| Cow position: | chr16:37455562-37455248 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 63, 9 |
| Conread position: | 236-727 |
| Cow position: | chr16:49279871-49280378 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 327 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 64, 9 |
| Conread position: | 237-820 |
| Cow position: | chr16:3330376-3330964 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 88 |
| Conread position: | 238-490 |
| Cow position: | chr16:56916633-56916369 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 7 |
| Conread position: | 242-643 |
| Cow position: | chr16:11781949-11781543 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 272 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 53, 232 |
| Conread position: | 242-820 |
| Cow position: | chr16:19779207-19778617 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 32 |
| Conread position: | 243-589 |
| Cow position: | chr16:19638504-19638852 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 256 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 11, 157 |
| Conread position: | 245-560 |
| Cow position: | chr16:26105614-26105285 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 56, 128 |
| Conread position: | 245-656 |
| Cow position: | chr16:17056524-17056105 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 80 |
| Conread position: | 245-665 |
| Cow position: | chr16:31591470-31591040 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 77 |
| Conread position: | 245-762 |
| Cow position: | chr16:28437030-28436485 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 205 |
| Conread position: | 245-794 |
| Cow position: | chr16:39824381-39824930 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 133 |
| Conread position: | 248-820 |
| Cow position: | chr16:15567705-15568292 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 131 |
| Conread position: | 248-822 |
| Cow position: | chr16:27299676-27299113 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 372 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 251-550 |
| Cow position: | chr16:27714359-27714069 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 55, 179 |
| Conread position: | 251-773 |
| Cow position: | chr16:25171798-25172337 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 164 |
| Conread position: | 252-780 |
| Cow position: | chr16:16897911-16898448 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 35 |
| Conread position: | 252-820 |
| Cow position: | chr16:337619-338220 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 70 |
| Conread position: | 256-820 |
| Cow position: | chr16:837774-838347 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 221 |
| Conread position: | 256-820 |
| Cow position: | chr16:2726772-2726180 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 243 |
| Conread position: | 256-820 |
| Cow position: | chr16:43648575-43649137 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 366 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 16, 123 |
| Conread position: | 258-752 |
| Cow position: | chr16:16520295-16519804 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 23 |
| Conread position: | 262-561 |
| Cow position: | chr16:38023785-38024090 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 11, 203 |
| Conread position: | 262-748 |
| Cow position: | chr16:56120133-56120619 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 44 |
| Conread position: | 262-818 |
| Cow position: | chr16:48334107-48333561 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 60 |
| Conread position: | 262-820 |
| Cow position: | chr16:46500653-46501235 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 376 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 112, 42 |
| Conread position: | 263-820 |
| Cow position: | chr16:25258286-25258837 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 62 |
| Conread position: | 263-820 |
| Cow position: | chr16:47474722-47475278 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 11 |
| Conread position: | 273-820 |
| Cow position: | chr16:28470600-28470027 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 213 |
| Conread position: | 282-635 |
| Cow position: | chr16:19080456-19080819 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 13 |
| Conread position: | 297-646 |
| Cow position: | chr16:51038579-51038926 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 256 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 93, 23 |
| Conread position: | 297-744 |
| Cow position: | chr16:10565275-10564824 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 316 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 32, 13 |
| Conread position: | 297-820 |
| Cow position: | chr16:49221380-49220883 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 20 |
| Conread position: | 298-524 |
| Cow position: | chr16:3918569-3918797 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 29, 19 |
| Conread position: | 298-558 |
| Cow position: | chr16:23808832-23809082 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 256, 22 |
| Conread position: | 298-820 |
| Cow position: | chr16:33032-33566 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 19 |
| Conread position: | 298-820 |
| Cow position: | chr16:5662339-5662874 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 19 |
| Conread position: | 299-820 |
| Cow position: | chr16:40557442-40556900 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 166 |
| Conread position: | 324-767 |
| Cow position: | chr16:9931274-9931714 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 300 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 27, 65 |
| Conread position: | 324-820 |
| Cow position: | chr16:8648486-8648977 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 326 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 35, 127 |
| Conread position: | 324-820 |
| Cow position: | chr16:51403361-51402841 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 341 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 23, 325 |
| Conread position: | 325-642 |
| Cow position: | chr16:41562618-41562939 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 41, 127 |
| Conread position: | 328-820 |
| Cow position: | chr16:19150052-19149567 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 143 |
| Conread position: | 328-820 |
| Cow position: | chr16:27823693-27823215 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 319 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 65, 39 |
| Conread position: | 329-809 |
| Cow position: | chr16:16228857-16229331 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 126 |
| Conread position: | 333-820 |
| Cow position: | chr16:12668245-12667744 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 15 |
| Conread position: | 337-820 |
| Cow position: | chr16:41685704-41685223 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 82 |
| Conread position: | 347-820 |
| Cow position: | chr16:2238207-2237736 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 88 |
| Conread position: | 359-820 |
| Cow position: | chr16:41754046-41753578 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 85 |
| Conread position: | 361-820 |
| Cow position: | chr16:1960043-1959591 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 80 |
| Conread position: | 361-820 |
| Cow position: | chr16:12537378-12536917 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 25 |
| Conread position: | 361-820 |
| Cow position: | chr16:41571960-41572434 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 83 |
| Conread position: | 364-622 |
| Cow position: | chr16:39366337-39366082 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 29, 18 |
| Conread position: | 365-749 |
| Cow position: | chr16:35159950-35160328 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 265 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 23, 32 |
| Conread position: | 373-820 |
| Cow position: | chr16:32937102-32937545 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 97 |
| Conread position: | 373-831 |
| Cow position: | chr16:30072007-30072449 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 297 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 17, 94 |
| Conread position: | 374-643 |
| Cow position: | chr16:7464902-7465174 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 203 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 177, 14 |
| Conread position: | 374-673 |
| Cow position: | chr16:18677932-18678237 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 9, 40 |
| Conread position: | 374-820 |
| Cow position: | chr16:5871477-5871928 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 11 |
| Conread position: | 375-820 |
| Cow position: | chr16:2410352-2409899 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 78 |
| Conread position: | 376-550 |
| Cow position: | chr16:25933282-25933453 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 13, 94 |
| Conread position: | 376-800 |
| Cow position: | chr16:10568238-10568645 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 136, 70 |
| Conread position: | 377-522 |
| Cow position: | chr16:34503903-34504049 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 11, 61 |
| Conread position: | 377-820 |
| Cow position: | chr16:52591091-52590648 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 93 |
| Conread position: | 377-829 |
| Cow position: | chr16:1860817-1861279 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 100 |
| Conread position: | 378-814 |
| Cow position: | chr16:707666-707234 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 289 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 181, 23 |
| Conread position: | 379-820 |
| Cow position: | chr16:42240322-42240751 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 279 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 24, 42 |
| Conread position: | 380-820 |
| Cow position: | chr16:23671293-23671743 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 60 |
| Conread position: | 382-806 |
| Cow position: | chr16:26655601-26656007 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 7, 88 |
| Conread position: | 387-820 |
| Cow position: | chr16:5527790-5527351 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 67 |
| Conread position: | 390-819 |
| Cow position: | chr16:24764959-24764521 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 298 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 18, 8 |
| Conread position: | 395-820 |
| Cow position: | chr16:37480253-37479821 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 80 |
| Conread position: | 397-794 |
| Cow position: | chr16:28158163-28158576 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 72 |
| Conread position: | 401-767 |
| Cow position: | chr16:16991457-16991830 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 244 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 33, 17 |
| Conread position: | 422-659 |
| Cow position: | chr16:29208539-29208308 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 120, 47 |
| Conread position: | 422-767 |
| Cow position: | chr16:44669755-44669416 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 122, 26 |
| Conread position: | 435-776 |
| Cow position: | chr16:4301565-4301203 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 41, 195 |
| Conread position: | 435-820 |
| Cow position: | chr16:41762464-41762853 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 271 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 30, 59 |
| Conread position: | 440-767 |
| Cow position: | chr16:27005699-27006011 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 237, 29 |
| Conread position: | 472-796 |
| Cow position: | chr16:49233806-49233479 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 13, 125 |
| Conread position: | 484-820 |
| Cow position: | chr16:47627960-47627615 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 6, 113 |
| Conread position: | 492-820 |
| Cow position: | chr16:18667084-18667417 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 71, 143 |
| Conread position: | 497-820 |
| Cow position: | chr16:16240581-16240259 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 65, 23 |
| Conread position: | 506-814 |
| Cow position: | chr16:44410776-44411067 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 507-828 |
| Cow position: | chr16:42735863-42735544 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 7, 96 |
| Conread position: | 512-783 |
| Cow position: | chr16:34504265-34504537 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 45, 18 |
| Conread position: | 539-820 |
| Cow position: | chr16:5119269-5118984 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 90 |
| Conread position: | 547-807 |
| Cow position: | chr16:12955782-12955535 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 129, 22 |
| Conread position: | 552-820 |
| Cow position: | chr16:28169555-28169287 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 126, 73 |
| Conread position: | 558-758 |
| Cow position: | chr16:29034709-29034911 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 15, 69 |
| Conread position: | 565-828 |
| Cow position: | chr16:23809140-23809393 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 113, 29 |
| Conread position: | 588-820 |
| Cow position: | chr16:46628786-46629019 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 607-822 |
| Cow position: | chr16:25934009-25934223 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 69, 7 |
| Conread position: | 618-820 |
| Cow position: | chr16:20193339-20193137 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 60, 7 |
| Conread position: | 622-820 |
| Cow position: | chr16:43846378-43846182 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 56, 28 |
| Conread position: | 625-820 |
| Cow position: | chr16:3828501-3828307 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 53, 109 |
| Conread position: | 628-820 |
| Cow position: | chr16:27712342-27712151 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 48, 107 |
| Conread position: | 633-817 |
| Cow position: | chr16:25740108-25740287 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 114 |
| Conread position: | 633-822 |
| Cow position: | chr16:41563218-41563420 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 635-820 |
| Cow position: | chr16:7465453-7465639 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 38, 67 |
Show alignments to all cow chromosomes.