Cow genome map

Conread name: Ss1.1-Pig4-TMW8054M19.5

Conread position: 224-560
Cow position:
Alignm length: 347
Alignm identity: 238
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 30, 39

Conread position: 225-550
Cow position:
Alignm length: 337
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-550
Cow position:
Alignm length: 337
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-590
Cow position:
Alignm length: 377
Alignm identity: 263
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 73, 20

Conread position: 225-819
Cow position:
Alignm length: 616
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position:
Alignm length: 620
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 20

Conread position: 225-820
Cow position:
Alignm length: 629
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 20

Conread position: 225-820
Cow position:
Alignm length: 620
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 20

Conread position: 227-446
Cow position:
Alignm length: 224
Alignm identity: 152
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 72, 19

Conread position: 227-767
Cow position:
Alignm length: 572
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 18

Conread position: 227-784
Cow position:
Alignm length: 582
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 18

Conread position: 227-820
Cow position:
Alignm length: 613
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 19

Conread position: 227-820
Cow position:
Alignm length: 609
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 18

Conread position: 228-819
Cow position:
Alignm length: 619
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 19

Conread position: 228-820
Cow position:
Alignm length: 607
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 173

Conread position: 228-821
Cow position:
Alignm length: 616
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 94

Conread position: 229-734
Cow position:
Alignm length: 527
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 92

Conread position: 229-820
Cow position:
Alignm length: 607
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 90

Conread position: 229-828
Cow position:
Alignm length: 626
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 22

Conread position: 231-687
Cow position:
Alignm length: 474
Alignm identity: 319
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 70, 14

Conread position: 231-820
Cow position:
Alignm length: 595
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 20

Conread position: 231-828
Cow position:
Alignm length: 619
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 14

Conread position: 232-588
Cow position:
Alignm length: 361
Alignm identity: 250
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 65, 96

Conread position: 232-633
Cow position:
Alignm length: 432
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-663
Cow position:
Alignm length: 459
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-687
Cow position:
Alignm length: 479
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 13

Conread position: 232-820
Cow position:
Alignm length: 613
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position:
Alignm length: 614
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position:
Alignm length: 612
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position:
Alignm length: 615
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position:
Alignm length: 610
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 13

Conread position: 232-820
Cow position:
Alignm length: 615
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position:
Alignm length: 606
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position:
Alignm length: 616
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position:
Alignm length: 610
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position:
Alignm length: 609
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position:
Alignm length: 610
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 13

Conread position: 232-820
Cow position:
Alignm length: 609
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 232-820
Cow position:
Alignm length: 608
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position:
Alignm length: 623
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position:
Alignm length: 620
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position:
Alignm length: 616
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 13

Conread position: 233-820
Cow position:
Alignm length: 604
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 174

Conread position: 233-820
Cow position:
Alignm length: 608
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 229

Conread position: 235-558
Cow position:
Alignm length: 339
Alignm identity: 237
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 63, 10

Conread position: 236-479
Cow position:
Alignm length: 255
Alignm identity: 182
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 32, 9

Conread position: 236-560
Cow position:
Alignm length: 334
Alignm identity: 225
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 63, 9

Conread position: 236-727
Cow position:
Alignm length: 517
Alignm identity: 327
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 64, 9

Conread position: 237-820
Cow position:
Alignm length: 599
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 88

Conread position: 238-490
Cow position:
Alignm length: 268
Alignm identity: 182
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 7

Conread position: 242-643
Cow position:
Alignm length: 411
Alignm identity: 272
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 53, 232

Conread position: 242-820
Cow position:
Alignm length: 602
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 32

Conread position: 243-589
Cow position:
Alignm length: 360
Alignm identity: 256
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 11, 157

Conread position: 245-560
Cow position:
Alignm length: 336
Alignm identity: 235
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 56, 128

Conread position: 245-656
Cow position:
Alignm length: 431
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 80

Conread position: 245-665
Cow position:
Alignm length: 439
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 77

Conread position: 245-762
Cow position:
Alignm length: 555
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 205

Conread position: 245-794
Cow position:
Alignm length: 570
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 133

Conread position: 248-820
Cow position:
Alignm length: 599
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 131

Conread position: 248-822
Cow position:
Alignm length: 586
Alignm identity: 372
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 23, 11

Conread position: 251-550
Cow position:
Alignm length: 305
Alignm identity: 205
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 55, 179

Conread position: 251-773
Cow position:
Alignm length: 550
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 164

Conread position: 252-780
Cow position:
Alignm length: 547
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 35

Conread position: 252-820
Cow position:
Alignm length: 611
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 70

Conread position: 256-820
Cow position:
Alignm length: 585
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 221

Conread position: 256-820
Cow position:
Alignm length: 601
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 243

Conread position: 256-820
Cow position:
Alignm length: 583
Alignm identity: 366
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 16, 123

Conread position: 258-752
Cow position:
Alignm length: 509
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 23

Conread position: 262-561
Cow position:
Alignm length: 311
Alignm identity: 208
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 11, 203

Conread position: 262-748
Cow position:
Alignm length: 501
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 44

Conread position: 262-818
Cow position:
Alignm length: 571
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 60

Conread position: 262-820
Cow position:
Alignm length: 590
Alignm identity: 376
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 112, 42

Conread position: 263-820
Cow position:
Alignm length: 568
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 62

Conread position: 263-820
Cow position:
Alignm length: 575
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 11

Conread position: 273-820
Cow position:
Alignm length: 579
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 213

Conread position: 282-635
Cow position:
Alignm length: 371
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 13

Conread position: 297-646
Cow position:
Alignm length: 362
Alignm identity: 256
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 93, 23

Conread position: 297-744
Cow position:
Alignm length: 467
Alignm identity: 316
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 32, 13

Conread position: 297-820
Cow position:
Alignm length: 529
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 20

Conread position: 298-524
Cow position:
Alignm length: 234
Alignm identity: 168
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 29, 19

Conread position: 298-558
Cow position:
Alignm length: 262
Alignm identity: 187
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 256, 22

Conread position: 298-820
Cow position:
Alignm length: 549
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 19

Conread position: 298-820
Cow position:
Alignm length: 542
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 19

Conread position: 299-820
Cow position:
Alignm length: 557
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 166

Conread position: 324-767
Cow position:
Alignm length: 459
Alignm identity: 300
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 27, 65

Conread position: 324-820
Cow position:
Alignm length: 510
Alignm identity: 326
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 35, 127

Conread position: 324-820
Cow position:
Alignm length: 524
Alignm identity: 341
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 23, 325

Conread position: 325-642
Cow position:
Alignm length: 331
Alignm identity: 224
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 127

Conread position: 328-820
Cow position:
Alignm length: 504
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 143

Conread position: 328-820
Cow position:
Alignm length: 498
Alignm identity: 319
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 65, 39

Conread position: 329-809
Cow position:
Alignm length: 493
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 126

Conread position: 333-820
Cow position:
Alignm length: 508
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 15

Conread position: 337-820
Cow position:
Alignm length: 501
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 82

Conread position: 347-820
Cow position:
Alignm length: 487
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 88

Conread position: 359-820
Cow position:
Alignm length: 487
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 85

Conread position: 361-820
Cow position:
Alignm length: 466
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 80

Conread position: 361-820
Cow position:
Alignm length: 474
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 25

Conread position: 361-820
Cow position:
Alignm length: 481
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 83

Conread position: 364-622
Cow position:
Alignm length: 261
Alignm identity: 175
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 29, 18

Conread position: 365-749
Cow position:
Alignm length: 400
Alignm identity: 265
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 23, 32

Conread position: 373-820
Cow position:
Alignm length: 462
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 97

Conread position: 373-831
Cow position:
Alignm length: 464
Alignm identity: 297
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 17, 94

Conread position: 374-643
Cow position:
Alignm length: 279
Alignm identity: 203
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 177, 14

Conread position: 374-673
Cow position:
Alignm length: 312
Alignm identity: 218
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 9, 40

Conread position: 374-820
Cow position:
Alignm length: 466
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 11

Conread position: 375-820
Cow position:
Alignm length: 465
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 78

Conread position: 376-550
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 13, 94

Conread position: 376-800
Cow position:
Alignm length: 433
Alignm identity: 289
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 136, 70

Conread position: 377-522
Cow position:
Alignm length: 150
Alignm identity: 120
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 11, 61

Conread position: 377-820
Cow position:
Alignm length: 455
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 93

Conread position: 377-829
Cow position:
Alignm length: 469
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 100

Conread position: 378-814
Cow position:
Alignm length: 451
Alignm identity: 289
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 181, 23

Conread position: 379-820
Cow position:
Alignm length: 448
Alignm identity: 279
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 42

Conread position: 380-820
Cow position:
Alignm length: 457
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 60

Conread position: 382-806
Cow position:
Alignm length: 433
Alignm identity: 275
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 88

Conread position: 387-820
Cow position:
Alignm length: 446
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 67

Conread position: 390-819
Cow position:
Alignm length: 453
Alignm identity: 298
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 18, 8

Conread position: 395-820
Cow position:
Alignm length: 439
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 80

Conread position: 397-794
Cow position:
Alignm length: 418
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 72

Conread position: 401-767
Cow position:
Alignm length: 377
Alignm identity: 244
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 33, 17

Conread position: 422-659
Cow position:
Alignm length: 239
Alignm identity: 171
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 120, 47

Conread position: 422-767
Cow position:
Alignm length: 350
Alignm identity: 233
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 122, 26

Conread position: 435-776
Cow position:
Alignm length: 366
Alignm identity: 246
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 41, 195

Conread position: 435-820
Cow position:
Alignm length: 398
Alignm identity: 271
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 30, 59

Conread position: 440-767
Cow position:
Alignm length: 329
Alignm identity: 229
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 237, 29

Conread position: 472-796
Cow position:
Alignm length: 333
Alignm identity: 223
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 13, 125

Conread position: 484-820
Cow position:
Alignm length: 353
Alignm identity: 244
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 6, 113

Conread position: 492-820
Cow position:
Alignm length: 340
Alignm identity: 233
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 71, 143

Conread position: 497-820
Cow position:
Alignm length: 334
Alignm identity: 223
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 65, 23

Conread position: 506-814
Cow position:
Alignm length: 309
Alignm identity: 200
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 507-828
Cow position:
Alignm length: 329
Alignm identity: 217
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 7, 96

Conread position: 512-783
Cow position:
Alignm length: 279
Alignm identity: 207
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 45, 18

Conread position: 539-820
Cow position:
Alignm length: 287
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 90

Conread position: 547-807
Cow position:
Alignm length: 262
Alignm identity: 181
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 129, 22

Conread position: 552-820
Cow position:
Alignm length: 270
Alignm identity: 189
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 126, 73

Conread position: 558-758
Cow position:
Alignm length: 204
Alignm identity: 144
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 15, 69

Conread position: 565-828
Cow position:
Alignm length: 265
Alignm identity: 183
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 113, 29

Conread position: 588-820
Cow position:
Alignm length: 237
Alignm identity: 166
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 27

Conread position: 607-822
Cow position:
Alignm length: 221
Alignm identity: 162
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 69, 7

Conread position: 618-820
Cow position:
Alignm length: 204
Alignm identity: 152
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 60, 7

Conread position: 622-820
Cow position:
Alignm length: 200
Alignm identity: 150
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 28

Conread position: 625-820
Cow position:
Alignm length: 197
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 109

Conread position: 628-820
Cow position:
Alignm length: 194
Alignm identity: 137
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 48, 107

Conread position: 633-817
Cow position:
Alignm length: 187
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 114

Conread position: 633-822
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 635-820
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 67

Show alignments to all cow chromosomes.