Cow genome map

Conread name: Ss1.1-Pig4-TMW8054M19.5

Conread position: 43-658
Cow position:
Alignm length: 630
Alignm identity: 202
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 345, 377

Conread position: 222-820
Cow position:
Alignm length: 626
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 23

Conread position: 225-514
Cow position:
Alignm length: 303
Alignm identity: 211
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 73, 20

Conread position: 225-550
Cow position:
Alignm length: 337
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position:
Alignm length: 617
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 26

Conread position: 225-820
Cow position:
Alignm length: 620
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position:
Alignm length: 621
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position:
Alignm length: 619
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position:
Alignm length: 620
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 20

Conread position: 225-820
Cow position:
Alignm length: 620
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position:
Alignm length: 620
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position:
Alignm length: 621
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position:
Alignm length: 623
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 21

Conread position: 225-828
Cow position:
Alignm length: 623
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 21

Conread position: 227-676
Cow position:
Alignm length: 476
Alignm identity: 310
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 68, 20

Conread position: 227-768
Cow position:
Alignm length: 556
Alignm identity: 362
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 68, 18

Conread position: 227-820
Cow position:
Alignm length: 612
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 18

Conread position: 228-820
Cow position:
Alignm length: 614
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 17

Conread position: 228-820
Cow position:
Alignm length: 618
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 94

Conread position: 228-821
Cow position:
Alignm length: 618
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 94

Conread position: 229-633
Cow position:
Alignm length: 417
Alignm identity: 284
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 41, 31

Conread position: 230-809
Cow position:
Alignm length: 596
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 21

Conread position: 232-471
Cow position:
Alignm length: 255
Alignm identity: 174
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 67, 13

Conread position: 232-597
Cow position:
Alignm length: 386
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-731
Cow position:
Alignm length: 523
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 13

Conread position: 232-820
Cow position:
Alignm length: 612
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position:
Alignm length: 612
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-821
Cow position:
Alignm length: 613
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 260

Conread position: 232-821
Cow position:
Alignm length: 605
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-821
Cow position:
Alignm length: 612
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 236-695
Cow position:
Alignm length: 477
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 9

Conread position: 242-635
Cow position:
Alignm length: 405
Alignm identity: 266
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 55, 75

Conread position: 242-676
Cow position:
Alignm length: 451
Alignm identity: 297
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 58, 80

Conread position: 242-820
Cow position:
Alignm length: 605
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 78

Conread position: 242-820
Cow position:
Alignm length: 612
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 257

Conread position: 243-471
Cow position:
Alignm length: 242
Alignm identity: 170
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 6, 221

Conread position: 243-828
Cow position:
Alignm length: 618
Alignm identity: 397
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 43, 25

Conread position: 244-676
Cow position:
Alignm length: 444
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 174

Conread position: 245-623
Cow position:
Alignm length: 403
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 78

Conread position: 245-820
Cow position:
Alignm length: 601
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 23

Conread position: 245-820
Cow position:
Alignm length: 602
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 244

Conread position: 245-820
Cow position:
Alignm length: 594
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 77

Conread position: 245-820
Cow position:
Alignm length: 600
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 241

Conread position: 245-820
Cow position:
Alignm length: 599
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 236

Conread position: 256-767
Cow position:
Alignm length: 536
Alignm identity: 351
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 43, 73

Conread position: 259-820
Cow position:
Alignm length: 583
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 61

Conread position: 259-828
Cow position:
Alignm length: 583
Alignm identity: 390
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 41, 63

Conread position: 261-820
Cow position:
Alignm length: 577
Alignm identity: 373
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 30, 12

Conread position: 262-781
Cow position:
Alignm length: 543
Alignm identity: 355
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 50, 42

Conread position: 262-820
Cow position:
Alignm length: 580
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 226

Conread position: 263-820
Cow position:
Alignm length: 579
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 146

Conread position: 264-558
Cow position:
Alignm length: 302
Alignm identity: 206
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 36, 122

Conread position: 264-767
Cow position:
Alignm length: 534
Alignm identity: 352
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 36, 56

Conread position: 264-820
Cow position:
Alignm length: 569
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 176

Conread position: 265-765
Cow position:
Alignm length: 517
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 22

Conread position: 283-719
Cow position:
Alignm length: 449
Alignm identity: 294
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 17, 96

Conread position: 297-794
Cow position:
Alignm length: 506
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 139

Conread position: 297-795
Cow position:
Alignm length: 512
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 18

Conread position: 297-818
Cow position:
Alignm length: 539
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 23

Conread position: 297-828
Cow position:
Alignm length: 542
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 93

Conread position: 298-820
Cow position:
Alignm length: 542
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 324-812
Cow position:
Alignm length: 504
Alignm identity: 325
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 28, 67

Conread position: 328-820
Cow position:
Alignm length: 503
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 137

Conread position: 332-794
Cow position:
Alignm length: 480
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 142

Conread position: 345-820
Cow position:
Alignm length: 494
Alignm identity: 325
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 98, 9

Conread position: 346-820
Cow position:
Alignm length: 488
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 47

Conread position: 349-819
Cow position:
Alignm length: 489
Alignm identity: 316
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 25, 17

Conread position: 350-743
Cow position:
Alignm length: 407
Alignm identity: 267
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 14, 88

Conread position: 360-820
Cow position:
Alignm length: 476
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 109

Conread position: 367-692
Cow position:
Alignm length: 340
Alignm identity: 234
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 27, 7

Conread position: 370-812
Cow position:
Alignm length: 466
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 31

Conread position: 373-692
Cow position:
Alignm length: 323
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 53

Conread position: 373-728
Cow position:
Alignm length: 370
Alignm identity: 242
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 51

Conread position: 374-692
Cow position:
Alignm length: 323
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 80

Conread position: 375-731
Cow position:
Alignm length: 369
Alignm identity: 238
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 171, 13

Conread position: 376-777
Cow position:
Alignm length: 416
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 93

Conread position: 376-828
Cow position:
Alignm length: 472
Alignm identity: 299
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 12, 227

Conread position: 377-720
Cow position:
Alignm length: 349
Alignm identity: 232
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 170, 50

Conread position: 379-643
Cow position:
Alignm length: 275
Alignm identity: 191
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 172, 16

Conread position: 385-689
Cow position:
Alignm length: 318
Alignm identity: 215
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 78, 39

Conread position: 385-727
Cow position:
Alignm length: 350
Alignm identity: 229
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 85

Conread position: 387-820
Cow position:
Alignm length: 452
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 82

Conread position: 393-558
Cow position:
Alignm length: 166
Alignm identity: 127
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 413-820
Cow position:
Alignm length: 413
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 50

Conread position: 437-820
Cow position:
Alignm length: 390
Alignm identity: 257
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 94, 57

Conread position: 455-673
Cow position:
Alignm length: 221
Alignm identity: 164
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 30, 102

Conread position: 456-820
Cow position:
Alignm length: 380
Alignm identity: 257
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 117, 13

Conread position: 456-829
Cow position:
Alignm length: 388
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 43

Conread position: 457-727
Cow position:
Alignm length: 285
Alignm identity: 192
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 84, 12

Conread position: 471-820
Cow position:
Alignm length: 362
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 16

Conread position: 472-828
Cow position:
Alignm length: 369
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 17

Conread position: 482-821
Cow position:
Alignm length: 347
Alignm identity: 231
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 118, 48

Conread position: 498-821
Cow position:
Alignm length: 330
Alignm identity: 211
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 93

Conread position: 546-820
Cow position:
Alignm length: 278
Alignm identity: 195
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 132, 82

Conread position: 552-820
Cow position:
Alignm length: 270
Alignm identity: 182
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 123, 76

Conread position: 552-820
Cow position:
Alignm length: 273
Alignm identity: 191
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 71

Conread position: 565-793
Cow position:
Alignm length: 231
Alignm identity: 160
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 81, 60

Conread position: 565-820
Cow position:
Alignm length: 257
Alignm identity: 182
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 113, 46

Conread position: 565-820
Cow position:
Alignm length: 260
Alignm identity: 177
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 112, 57

Conread position: 589-820
Cow position:
Alignm length: 233
Alignm identity: 173
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 89, 36

Conread position: 607-820
Cow position:
Alignm length: 216
Alignm identity: 164
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 71, 6

Conread position: 607-820
Cow position:
Alignm length: 215
Alignm identity: 159
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 71, 6

Conread position: 624-820
Cow position:
Alignm length: 198
Alignm identity: 145
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 54, 0

Conread position: 632-820
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 636-820
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 638-820
Cow position:
Alignm length: 184
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 40, 0

Conread position: 648-767
Cow position:
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 0

Show alignments to all cow chromosomes.