Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8054M19.5
        

               Conread position:
               131-820
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               428, 401
               

               Conread position:
               224-820
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 21
               

               Conread position:
               225-525
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               225-819
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 20
               

               Conread position:
               225-820
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 21
               

               Conread position:
               225-820
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               228-561
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 94
               

               Conread position:
               231-464
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               68, 14
               

               Conread position:
               232-599
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               232-654
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               232-676
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 10
               

               Conread position:
               232-688
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 13
               

               Conread position:
               232-762
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 252
               

               Conread position:
               232-813
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               232-819
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               232-820
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               232-820
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               232-820
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               232-820
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               232-820
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               232-820
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               233-636
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               278
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               67, 12
               

               Conread position:
               237-827
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               377
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               63, 8
               

               Conread position:
               242-535
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               23, 17
               

               Conread position:
               242-599
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               241
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               58, 79
               

               Conread position:
               242-627
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               288
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               55, 190
               

               Conread position:
               242-748
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               349
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               58, 179
               

               Conread position:
               242-781
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 95
               

               Conread position:
               242-813
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               360
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               58, 119
               

               Conread position:
               242-821
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 224
               

               Conread position:
               243-828
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 79
               

               Conread position:
               244-803
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 48
               

               Conread position:
               248-820
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               374
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               49, 225
               

               Conread position:
               248-820
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 77
               

               Conread position:
               252-828
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 68
               

               Conread position:
               256-729
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 221
               

               Conread position:
               261-820
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 61
               

               Conread position:
               262-649
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               253
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               84, 42
               

               Conread position:
               262-658
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               264
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               27, 58
               

               Conread position:
               262-813
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 63
               

               Conread position:
               264-625
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               264
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               264-820
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 56
               

               Conread position:
               266-820
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 164
               

               Conread position:
               296-480
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               56, 24
               

               Conread position:
               297-561
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               33, 184
               

               Conread position:
               297-820
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 181
               

               Conread position:
               297-820
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 184
               

               Conread position:
               297-820
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 184
               

               Conread position:
               305-820
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 12
               

               Conread position:
               324-820
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               337
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               37, 44
               

               Conread position:
               325-616
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               16, 61
               

               Conread position:
               327-765
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               230, 55
               

               Conread position:
               329-781
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 52
               

               Conread position:
               330-570
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 14
               

               Conread position:
               336-671
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               56, 40
               

               Conread position:
               345-820
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               312
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               47, 113
               

               Conread position:
               347-820
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 94
               

               Conread position:
               348-528
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               109, 61
               

               Conread position:
               348-636
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 16
               

               Conread position:
               360-820
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               295
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               32, 48
               

               Conread position:
               360-828
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 224
               

               Conread position:
               363-820
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 52
               

               Conread position:
               363-821
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 119
               

               Conread position:
               364-663
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               187, 24
               

               Conread position:
               371-738
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 14
               

               Conread position:
               372-743
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 24
               

               Conread position:
               372-767
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               265
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               178, 23
               

               Conread position:
               374-798
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               278
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               14, 54
               

               Conread position:
               374-819
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               309
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               59, 24
               

               Conread position:
               377-746
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               239
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               171, 8
               

               Conread position:
               382-653
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               388-820
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               389-798
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 14
               

               Conread position:
               389-820
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 28
               

               Conread position:
               396-805
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               283
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               156, 71
               

               Conread position:
               400-600
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               143, 69
               

               Conread position:
               404-723
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               162, 61
               

               Conread position:
               409-781
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               266
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               138, 25
               

               Conread position:
               421-820
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               48, 31
               

               Conread position:
               434-820
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               281
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               128, 35
               

               Conread position:
               435-743
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               124, 34
               

               Conread position:
               447-819
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               13, 43
               

               Conread position:
               456-822
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               257
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               94, 36
               

               Conread position:
               458-828
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               110, 9
               

               Conread position:
               459-821
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 16
               

               Conread position:
               484-732
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               88, 68
               

               Conread position:
               489-820
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               15, 97
               

               Conread position:
               494-703
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               50, 45
               

               Conread position:
               503-820
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               54, 16
               

               Conread position:
               505-820
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 74
               

               Conread position:
               535-820
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 5
               

               Conread position:
               547-745
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               128, 18
               

               Conread position:
               551-817
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 77
               

               Conread position:
               565-820
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               113, 60
               

               Conread position:
               568-767
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               108, 57
               

               Conread position:
               573-820
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               23, 51
               

               Conread position:
               593-821
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               83, 32
               

               Conread position:
               606-744
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 58
               

               Conread position:
               611-820
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               8, 18
               

               Conread position:
               613-805
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               65, 12
               

               Conread position:
               613-820
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               65, 12
               

               Conread position:
               622-820
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               624-755
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               624-818
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               52, 173
               

               Conread position:
               662-820
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               16, 0
               
Show alignments to all cow chromosomes.