Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8054M19.5
        

               Conread position:
               225-601
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               225-762
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 20
               

               Conread position:
               225-820
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               225-820
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               225-820
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               225-820
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 20
               

               Conread position:
               227-658
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               307
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               61, 18
               

               Conread position:
               227-711
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 18
               

               Conread position:
               227-827
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 18
               

               Conread position:
               231-821
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 14
               

               Conread position:
               232-820
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               232-820
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 10
               

               Conread position:
               232-820
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               232-820
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 13
               

               Conread position:
               232-820
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               233-762
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 89
               

               Conread position:
               235-820
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               390
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               235-820
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 12
               

               Conread position:
               241-580
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               151, 63
               

               Conread position:
               242-550
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               40, 32
               

               Conread position:
               242-608
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               99, 53
               

               Conread position:
               242-718
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 31
               

               Conread position:
               242-762
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 83
               

               Conread position:
               242-820
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 129
               

               Conread position:
               242-820
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 84
               

               Conread position:
               243-820
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 252
               

               Conread position:
               245-820
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 221
               

               Conread position:
               245-820
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 80
               

               Conread position:
               245-820
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               248-589
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               56, 11
               

               Conread position:
               248-820
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 118
               

               Conread position:
               252-820
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 143
               

               Conread position:
               261-820
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 140
               

               Conread position:
               262-749
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               323
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               300, 37
               

               Conread position:
               262-819
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 88
               

               Conread position:
               263-478
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               281-802
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 86
               

               Conread position:
               281-820
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 206
               

               Conread position:
               297-819
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               344
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               85, 177
               

               Conread position:
               297-820
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 183
               

               Conread position:
               302-821
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               344
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               39, 155
               

               Conread position:
               310-820
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 172
               

               Conread position:
               319-820
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               332
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               7, 107
               

               Conread position:
               322-781
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 32
               

               Conread position:
               326-783
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               310
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               61, 92
               

               Conread position:
               326-820
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               341
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               21, 133
               

               Conread position:
               330-809
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               321
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               40, 68
               

               Conread position:
               340-783
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               318
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               52, 251
               

               Conread position:
               350-689
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               247
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               25, 17
               

               Conread position:
               363-809
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               61, 13
               

               Conread position:
               365-692
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               365-820
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 5
               

               Conread position:
               367-579
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               22, 53
               

               Conread position:
               371-707
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               13, 25
               

               Conread position:
               372-820
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               312
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               14, 85
               

               Conread position:
               382-820
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 18
               

               Conread position:
               385-818
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               291
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               50, 45
               

               Conread position:
               390-820
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 58
               

               Conread position:
               405-828
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 203
               

               Conread position:
               440-820
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               252
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               132, 68
               

               Conread position:
               456-781
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 20
               

               Conread position:
               489-766
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               138, 74
               

               Conread position:
               496-820
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 127
               

               Conread position:
               497-818
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               38, 139
               

               Conread position:
               507-817
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 124
               

               Conread position:
               543-779
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               39, 26
               

               Conread position:
               549-805
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               59, 66
               

               Conread position:
               549-820
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 21
               

               Conread position:
               564-734
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               54, 31
               

               Conread position:
               593-822
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               85, 32
               

               Conread position:
               599-820
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               79, 26
               

               Conread position:
               614-820
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               62, 11
               

               Conread position:
               615-820
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               624-820
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               54, 71
               

               Conread position:
               625-820
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               13, 19
               

               Conread position:
               628-821
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               50, 14
               

               Conread position:
               635-781
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               43, 12
               
Show alignments to all cow chromosomes.