Cow genome map

Conread name: Ss1.1-Pig4-TMW8054M19.5

Conread position: 225-597
Cow position:
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-808
Cow position:
Alignm length: 607
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position:
Alignm length: 625
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position:
Alignm length: 623
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position:
Alignm length: 617
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position:
Alignm length: 619
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position:
Alignm length: 619
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position:
Alignm length: 612
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 20

Conread position: 225-820
Cow position:
Alignm length: 614
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 20

Conread position: 225-820
Cow position:
Alignm length: 609
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 20

Conread position: 225-821
Cow position:
Alignm length: 610
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-821
Cow position:
Alignm length: 621
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 20

Conread position: 227-692
Cow position:
Alignm length: 480
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 18

Conread position: 227-816
Cow position:
Alignm length: 602
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 18

Conread position: 227-818
Cow position:
Alignm length: 626
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 24

Conread position: 227-820
Cow position:
Alignm length: 613
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 18

Conread position: 227-820
Cow position:
Alignm length: 609
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 18

Conread position: 227-828
Cow position:
Alignm length: 623
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 18

Conread position: 228-821
Cow position:
Alignm length: 614
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 17

Conread position: 229-476
Cow position:
Alignm length: 257
Alignm identity: 171
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 18

Conread position: 229-663
Cow position:
Alignm length: 459
Alignm identity: 297
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 15, 88

Conread position: 231-812
Cow position:
Alignm length: 604
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 16

Conread position: 231-820
Cow position:
Alignm length: 617
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 16

Conread position: 231-820
Cow position:
Alignm length: 613
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 14

Conread position: 232-550
Cow position:
Alignm length: 330
Alignm identity: 235
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 66, 13

Conread position: 232-676
Cow position:
Alignm length: 453
Alignm identity: 297
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 38, 13

Conread position: 232-692
Cow position:
Alignm length: 482
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position:
Alignm length: 624
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 13

Conread position: 232-820
Cow position:
Alignm length: 608
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 13

Conread position: 232-820
Cow position:
Alignm length: 607
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 13

Conread position: 232-820
Cow position:
Alignm length: 612
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position:
Alignm length: 608
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position:
Alignm length: 613
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position:
Alignm length: 612
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 13

Conread position: 232-820
Cow position:
Alignm length: 613
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 13

Conread position: 232-828
Cow position:
Alignm length: 622
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 13

Conread position: 235-560
Cow position:
Alignm length: 335
Alignm identity: 227
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 65, 10

Conread position: 241-502
Cow position:
Alignm length: 279
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 85

Conread position: 242-719
Cow position:
Alignm length: 502
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 80

Conread position: 242-722
Cow position:
Alignm length: 495
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 17

Conread position: 242-799
Cow position:
Alignm length: 582
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 20

Conread position: 242-806
Cow position:
Alignm length: 587
Alignm identity: 379
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 45, 54

Conread position: 242-818
Cow position:
Alignm length: 587
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 80

Conread position: 242-820
Cow position:
Alignm length: 603
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 80

Conread position: 242-820
Cow position:
Alignm length: 593
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 86

Conread position: 242-820
Cow position:
Alignm length: 602
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 224

Conread position: 243-523
Cow position:
Alignm length: 295
Alignm identity: 206
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 10, 38

Conread position: 243-820
Cow position:
Alignm length: 608
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 224

Conread position: 245-473
Cow position:
Alignm length: 233
Alignm identity: 165
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 147, 12

Conread position: 245-813
Cow position:
Alignm length: 598
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 246

Conread position: 248-527
Cow position:
Alignm length: 295
Alignm identity: 197
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 230

Conread position: 250-820
Cow position:
Alignm length: 588
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 229

Conread position: 251-809
Cow position:
Alignm length: 578
Alignm identity: 381
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 23, 73

Conread position: 251-819
Cow position:
Alignm length: 595
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 71

Conread position: 252-616
Cow position:
Alignm length: 375
Alignm identity: 241
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 19, 196

Conread position: 253-779
Cow position:
Alignm length: 536
Alignm identity: 347
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 47, 100

Conread position: 253-801
Cow position:
Alignm length: 572
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 48

Conread position: 256-820
Cow position:
Alignm length: 597
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 66

Conread position: 259-550
Cow position:
Alignm length: 300
Alignm identity: 200
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 202

Conread position: 259-820
Cow position:
Alignm length: 582
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 63

Conread position: 261-633
Cow position:
Alignm length: 388
Alignm identity: 264
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 39, 192

Conread position: 261-820
Cow position:
Alignm length: 576
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 64

Conread position: 262-740
Cow position:
Alignm length: 498
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 199

Conread position: 262-807
Cow position:
Alignm length: 558
Alignm identity: 364
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 36, 60

Conread position: 262-820
Cow position:
Alignm length: 570
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 39

Conread position: 266-417
Cow position:
Alignm length: 163
Alignm identity: 128
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 297-431
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 23

Conread position: 297-812
Cow position:
Alignm length: 518
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 23

Conread position: 297-818
Cow position:
Alignm length: 538
Alignm identity: 351
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 33, 71

Conread position: 297-820
Cow position:
Alignm length: 546
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 20

Conread position: 301-820
Cow position:
Alignm length: 537
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 140

Conread position: 303-828
Cow position:
Alignm length: 540
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 14

Conread position: 320-818
Cow position:
Alignm length: 503
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 151

Conread position: 324-502
Cow position:
Alignm length: 183
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 67, 93

Conread position: 329-806
Cow position:
Alignm length: 491
Alignm identity: 331
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 38, 123

Conread position: 329-819
Cow position:
Alignm length: 506
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 146

Conread position: 329-819
Cow position:
Alignm length: 506
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 146

Conread position: 337-820
Cow position:
Alignm length: 496
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 40

Conread position: 340-799
Cow position:
Alignm length: 468
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 129

Conread position: 354-528
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 360-820
Cow position:
Alignm length: 482
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 93

Conread position: 360-820
Cow position:
Alignm length: 468
Alignm identity: 298
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 32, 113

Conread position: 364-821
Cow position:
Alignm length: 465
Alignm identity: 322
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 7, 53

Conread position: 364-822
Cow position:
Alignm length: 477
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 110

Conread position: 373-794
Cow position:
Alignm length: 426
Alignm identity: 288
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 14, 37

Conread position: 373-818
Cow position:
Alignm length: 459
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 87

Conread position: 374-751
Cow position:
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 92

Conread position: 374-801
Cow position:
Alignm length: 438
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 133

Conread position: 375-818
Cow position:
Alignm length: 455
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 44

Conread position: 376-646
Cow position:
Alignm length: 281
Alignm identity: 210
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 175, 19

Conread position: 376-820
Cow position:
Alignm length: 460
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 74

Conread position: 380-820
Cow position:
Alignm length: 459
Alignm identity: 306
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 179, 21

Conread position: 383-820
Cow position:
Alignm length: 451
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 18

Conread position: 389-716
Cow position:
Alignm length: 337
Alignm identity: 230
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 180, 32

Conread position: 396-767
Cow position:
Alignm length: 398
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 73

Conread position: 404-786
Cow position:
Alignm length: 388
Alignm identity: 252
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 57, 17

Conread position: 404-820
Cow position:
Alignm length: 430
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 29

Conread position: 420-820
Cow position:
Alignm length: 418
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 102

Conread position: 425-654
Cow position:
Alignm length: 238
Alignm identity: 166
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 118, 50

Conread position: 428-666
Cow position:
Alignm length: 250
Alignm identity: 180
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 129, 47

Conread position: 435-821
Cow position:
Alignm length: 399
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 54

Conread position: 444-751
Cow position:
Alignm length: 327
Alignm identity: 226
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 106, 12

Conread position: 454-821
Cow position:
Alignm length: 381
Alignm identity: 248
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 67, 12

Conread position: 458-829
Cow position:
Alignm length: 375
Alignm identity: 241
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 117, 29

Conread position: 469-812
Cow position:
Alignm length: 354
Alignm identity: 239
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 108, 20

Conread position: 469-814
Cow position:
Alignm length: 346
Alignm identity: 230
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 471-812
Cow position:
Alignm length: 369
Alignm identity: 244
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 29, 172

Conread position: 472-788
Cow position:
Alignm length: 317
Alignm identity: 207
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 484-820
Cow position:
Alignm length: 350
Alignm identity: 245
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 6, 152

Conread position: 492-820
Cow position:
Alignm length: 340
Alignm identity: 243
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 65, 137

Conread position: 498-821
Cow position:
Alignm length: 329
Alignm identity: 222
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 64, 12

Conread position: 502-821
Cow position:
Alignm length: 334
Alignm identity: 225
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 52, 127

Conread position: 510-829
Cow position:
Alignm length: 331
Alignm identity: 230
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 49, 125

Conread position: 516-814
Cow position:
Alignm length: 314
Alignm identity: 208
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 116

Conread position: 547-797
Cow position:
Alignm length: 255
Alignm identity: 170
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 17

Conread position: 554-820
Cow position:
Alignm length: 275
Alignm identity: 186
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 23, 250

Conread position: 563-820
Cow position:
Alignm length: 259
Alignm identity: 182
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 115, 62

Conread position: 564-820
Cow position:
Alignm length: 258
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 61

Conread position: 565-820
Cow position:
Alignm length: 257
Alignm identity: 183
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 113, 27

Conread position: 565-820
Cow position:
Alignm length: 260
Alignm identity: 182
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 62, 0

Conread position: 565-820
Cow position:
Alignm length: 257
Alignm identity: 177
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 113, 11

Conread position: 565-828
Cow position:
Alignm length: 265
Alignm identity: 183
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 113, 57

Conread position: 566-828
Cow position:
Alignm length: 264
Alignm identity: 179
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 110, 58

Conread position: 579-828
Cow position:
Alignm length: 254
Alignm identity: 177
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 97, 49

Conread position: 592-820
Cow position:
Alignm length: 244
Alignm identity: 169
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 5

Conread position: 595-814
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 83, 32

Conread position: 596-818
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 63, 142

Conread position: 601-812
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 10

Conread position: 606-820
Cow position:
Alignm length: 216
Alignm identity: 157
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 69, 95

Conread position: 607-820
Cow position:
Alignm length: 216
Alignm identity: 149
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 608-820
Cow position:
Alignm length: 214
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 162

Conread position: 615-728
Cow position:
Alignm length: 115
Alignm identity: 96
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 618-820
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 60, 7

Conread position: 619-821
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 59, 6

Conread position: 635-809
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 639-820
Cow position:
Alignm length: 183
Alignm identity: 131
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 39, 55

Conread position: 641-828
Cow position:
Alignm length: 189
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 646-820
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 32, 0

Show alignments to all cow chromosomes.