Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8054M19.5
        

               Conread position:
               225-527
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               227
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               225-588
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               28, 20
               

               Conread position:
               225-628
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               251
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               105, 20
               

               Conread position:
               225-820
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               225-820
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               225-820
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               227-818
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 18
               

               Conread position:
               227-820
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 18
               

               Conread position:
               227-820
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 138
               

               Conread position:
               228-666
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 125
               

               Conread position:
               228-826
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               407
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               72, 18
               

               Conread position:
               230-645
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 234
               

               Conread position:
               231-819
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 16
               

               Conread position:
               231-820
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 11
               

               Conread position:
               231-821
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 14
               

               Conread position:
               232-467
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               67, 13
               

               Conread position:
               232-561
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               232-786
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               232-820
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               232-820
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               232-820
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 13
               

               Conread position:
               232-820
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               232-820
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               232-820
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 13
               

               Conread position:
               232-828
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               233-700
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               335
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               39, 26
               

               Conread position:
               234-692
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               313
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               75, 11
               

               Conread position:
               237-821
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 14
               

               Conread position:
               242-666
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               303
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               56, 184
               

               Conread position:
               242-804
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               379
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               56, 9
               

               Conread position:
               242-818
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 252
               

               Conread position:
               242-820
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 245
               

               Conread position:
               245-821
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 80
               

               Conread position:
               245-828
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 317
               

               Conread position:
               249-559
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 151
               

               Conread position:
               251-514
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               50, 148
               

               Conread position:
               252-788
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 238
               

               Conread position:
               258-670
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               282
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               42, 92
               

               Conread position:
               259-462
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               41, 63
               

               Conread position:
               261-682
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 106
               

               Conread position:
               262-820
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 224
               

               Conread position:
               262-820
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 203
               

               Conread position:
               262-820
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 60
               

               Conread position:
               263-781
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               343
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               37, 110
               

               Conread position:
               297-686
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               280
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               44, 73
               

               Conread position:
               297-743
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 20
               

               Conread position:
               297-745
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 164
               

               Conread position:
               298-821
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 19
               

               Conread position:
               299-820
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 18
               

               Conread position:
               323-816
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 65
               

               Conread position:
               325-812
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               323
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               67, 148
               

               Conread position:
               325-820
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 155
               

               Conread position:
               329-818
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               326
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               12, 39
               

               Conread position:
               340-761
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 83
               

               Conread position:
               340-820
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               313
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               74, 52
               

               Conread position:
               347-767
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               289
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               45, 111
               

               Conread position:
               360-820
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 69
               

               Conread position:
               376-527
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               12, 25
               

               Conread position:
               376-788
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 76
               

               Conread position:
               376-820
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 25
               

               Conread position:
               376-820
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 64
               

               Conread position:
               379-603
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               170, 90
               

               Conread position:
               388-818
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 13
               

               Conread position:
               391-692
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               246, 61
               

               Conread position:
               406-818
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               25, 50
               

               Conread position:
               458-818
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 29
               

               Conread position:
               459-820
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               266
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               92, 16
               

               Conread position:
               459-820
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               255
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               85, 16
               

               Conread position:
               492-820
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 144
               

               Conread position:
               497-820
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 139
               

               Conread position:
               507-723
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               52, 18
               

               Conread position:
               546-820
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               130, 26
               

               Conread position:
               547-752
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               131, 25
               

               Conread position:
               556-828
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               125, 13
               

               Conread position:
               564-820
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               190
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               114, 61
               

               Conread position:
               612-809
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               66, 13
               

               Conread position:
               626-820
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               50, 108
               

               Conread position:
               635-808
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               43, 28
               

               Conread position:
               639-820
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               128, 41
               

               Conread position:
               641-820
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               648-820
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               75, 0
               
Show alignments to all cow chromosomes.