Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8054M19.5
        

               Conread position:
               224-795
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 21
               

               Conread position:
               225-590
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               261
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               73, 21
               

               Conread position:
               225-645
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               225-692
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               225-717
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               225-767
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 20
               

               Conread position:
               225-812
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               225-819
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               225-820
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 21
               

               Conread position:
               225-820
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               227-692
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               314
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               71, 20
               

               Conread position:
               227-821
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 18
               

               Conread position:
               228-815
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 31
               

               Conread position:
               228-818
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 94
               

               Conread position:
               228-820
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 95
               

               Conread position:
               231-820
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 14
               

               Conread position:
               232-749
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               232-809
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               232-819
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               232-819
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 258
               

               Conread position:
               232-820
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 13
               

               Conread position:
               232-820
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               232-820
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               232-828
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               234-817
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 25
               

               Conread position:
               235-820
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 99
               

               Conread position:
               237-820
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 88
               

               Conread position:
               238-820
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 7
               

               Conread position:
               242-550
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               105, 49
               

               Conread position:
               242-643
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               58, 184
               

               Conread position:
               242-646
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 67
               

               Conread position:
               242-736
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 83
               

               Conread position:
               242-820
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 83
               

               Conread position:
               242-820
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 257
               

               Conread position:
               242-820
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 27
               

               Conread position:
               245-635
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               276
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               52, 77
               

               Conread position:
               248-820
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 123
               

               Conread position:
               248-820
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 77
               

               Conread position:
               248-822
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 208
               

               Conread position:
               251-522
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               49, 243
               

               Conread position:
               251-820
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 71
               

               Conread position:
               254-761
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               334
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               319, 48
               

               Conread position:
               255-783
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 71
               

               Conread position:
               255-820
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 62
               

               Conread position:
               261-683
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               301
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               38, 61
               

               Conread position:
               261-820
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 216
               

               Conread position:
               297-638
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               242
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               33, 97
               

               Conread position:
               297-724
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               296
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               39, 141
               

               Conread position:
               297-820
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 178
               

               Conread position:
               297-828
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 23
               

               Conread position:
               298-692
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               277
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               47, 22
               

               Conread position:
               299-549
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               28, 18
               

               Conread position:
               299-820
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 129
               

               Conread position:
               324-475
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               324-633
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               63, 136
               

               Conread position:
               324-795
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               311
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               25, 152
               

               Conread position:
               324-818
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               341
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               16, 44
               

               Conread position:
               324-819
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               325
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               17, 44
               

               Conread position:
               324-821
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               328
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               17, 87
               

               Conread position:
               325-820
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 129
               

               Conread position:
               325-828
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 55
               

               Conread position:
               334-819
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               334
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               35, 41
               

               Conread position:
               340-744
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 79
               

               Conread position:
               348-820
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               286
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               160, 66
               

               Conread position:
               360-781
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 92
               

               Conread position:
               360-788
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 119
               

               Conread position:
               365-818
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 32
               

               Conread position:
               369-814
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               314
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               132, 71
               

               Conread position:
               373-781
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               274
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               10, 98
               

               Conread position:
               373-820
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 27
               

               Conread position:
               376-821
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               287
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 21
               

               Conread position:
               377-640
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               196
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               180, 37
               

               Conread position:
               386-623
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               164, 8
               

               Conread position:
               401-692
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               221
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               151, 74
               

               Conread position:
               406-820
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               267
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               151, 63
               

               Conread position:
               414-820
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 61
               

               Conread position:
               435-820
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               269
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               15, 32
               

               Conread position:
               436-767
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               229
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               69, 33
               

               Conread position:
               461-819
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 28
               

               Conread position:
               469-776
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               21, 164
               

               Conread position:
               471-814
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               246
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               78, 9
               

               Conread position:
               471-828
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               44, 18
               

               Conread position:
               496-821
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 139
               

               Conread position:
               498-820
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 138
               

               Conread position:
               499-820
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               58, 110
               

               Conread position:
               510-819
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               222
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               17, 10
               

               Conread position:
               516-821
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               94, 45
               

               Conread position:
               542-818
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               35, 73
               

               Conread position:
               546-820
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               194
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               132, 18
               

               Conread position:
               564-784
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               173
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               114, 19
               

               Conread position:
               609-820
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               611-805
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               65, 19
               

               Conread position:
               614-820
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               62, 15
               

               Conread position:
               614-821
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               114, 11
               

               Conread position:
               623-828
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               55, 168
               

               Conread position:
               625-819
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               636-820
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               677-820
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               100, 11
               
Show alignments to all cow chromosomes.