Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8054M19.5
        

               Conread position:
               225-689
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               225-820
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               225-820
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               231-753
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 14
               

               Conread position:
               232-781
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 13
               

               Conread position:
               232-808
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               232-820
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 13
               

               Conread position:
               232-820
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               232-828
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 13
               

               Conread position:
               233-483
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               64, 247
               

               Conread position:
               235-812
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               374
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               65, 24
               

               Conread position:
               235-820
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 12
               

               Conread position:
               236-821
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 9
               

               Conread position:
               237-557
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               72, 139
               

               Conread position:
               242-490
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               88, 60
               

               Conread position:
               242-656
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               272
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               54, 69
               

               Conread position:
               242-820
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 69
               

               Conread position:
               242-820
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 143
               

               Conread position:
               245-812
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 14
               

               Conread position:
               245-818
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               245-820
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 76
               

               Conread position:
               248-643
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 236
               

               Conread position:
               248-820
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               248-820
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 214
               

               Conread position:
               251-463
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               49, 74
               

               Conread position:
               251-729
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               314
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               13, 8
               

               Conread position:
               259-820
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 63
               

               Conread position:
               262-828
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 60
               

               Conread position:
               297-820
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 15
               

               Conread position:
               299-698
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               248
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               93, 33
               

               Conread position:
               324-767
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               285
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               226, 27
               

               Conread position:
               328-814
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               320
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               62, 129
               

               Conread position:
               332-820
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 57
               

               Conread position:
               339-800
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               308
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               35, 25
               

               Conread position:
               340-654
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               234
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               48, 133
               

               Conread position:
               348-820
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 38
               

               Conread position:
               360-788
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 119
               

               Conread position:
               360-815
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 119
               

               Conread position:
               365-660
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               16, 95
               

               Conread position:
               373-744
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               14, 98
               

               Conread position:
               373-820
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 71
               

               Conread position:
               376-820
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 96
               

               Conread position:
               379-820
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               294
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               28, 90
               

               Conread position:
               384-732
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               248
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               191, 85
               

               Conread position:
               401-746
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               125, 50
               

               Conread position:
               413-820
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 62
               

               Conread position:
               414-744
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               186, 55
               

               Conread position:
               415-630
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               144, 54
               

               Conread position:
               421-820
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 54
               

               Conread position:
               456-749
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               43, 25
               

               Conread position:
               458-695
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               465-820
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               247
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               56, 22
               

               Conread position:
               466-818
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               247
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               19, 12
               

               Conread position:
               469-820
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 20
               

               Conread position:
               470-821
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               243
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               78, 26
               

               Conread position:
               473-731
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               85, 16
               

               Conread position:
               546-809
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               132, 23
               

               Conread position:
               556-820
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               89, 16
               

               Conread position:
               595-766
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               81, 30
               

               Conread position:
               624-820
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               54, 14
               

               Conread position:
               624-820
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               40, 83
               

               Conread position:
               677-828
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               706-820
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.