Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8054M19.5 |
| Conread position: | 223-820 |
| Cow position: | chr4:57957839-57958403 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 394 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 16, 26 |
| Conread position: | 224-820 |
| Cow position: | chr4:13494176-13494784 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 21 |
| Conread position: | 225-692 |
| Cow position: | chr4:45106306-45106790 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 225-812 |
| Cow position: | chr4:4416905-4417496 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 225-820 |
| Cow position: | chr4:160008-160609 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 17 |
| Conread position: | 225-820 |
| Cow position: | chr4:356757-357357 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 20 |
| Conread position: | 225-820 |
| Cow position: | chr4:530250-530870 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 225-820 |
| Cow position: | chr4:1929795-1929190 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 225-820 |
| Cow position: | chr4:3126650-3127262 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 225-820 |
| Cow position: | chr4:5881002-5881607 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 225-820 |
| Cow position: | chr4:6567232-6567831 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 225-820 |
| Cow position: | chr4:30472078-30472665 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 225-820 |
| Cow position: | chr4:32213010-32213624 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 17 |
| Conread position: | 225-820 |
| Cow position: | chr4:44780379-44779769 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 227-820 |
| Cow position: | chr4:10882399-10883001 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 24 |
| Conread position: | 227-820 |
| Cow position: | chr4:19005459-19004879 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 227-820 |
| Cow position: | chr4:34178388-34177804 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 15 |
| Conread position: | 228-820 |
| Cow position: | chr4:5443984-5443373 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 94 |
| Conread position: | 230-749 |
| Cow position: | chr4:50981332-50981862 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 355 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 66, 17 |
| Conread position: | 231-545 |
| Cow position: | chr4:11110423-11110115 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 68, 24 |
| Conread position: | 231-818 |
| Cow position: | chr4:14755814-14755225 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 14 |
| Conread position: | 232-682 |
| Cow position: | chr4:31564451-31563969 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-805 |
| Cow position: | chr4:12588184-12588764 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-820 |
| Cow position: | chr4:99363-98761 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 13 |
| Conread position: | 232-820 |
| Cow position: | chr4:1049404-1048812 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-820 |
| Cow position: | chr4:6489511-6488916 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 13 |
| Conread position: | 232-820 |
| Cow position: | chr4:12240364-12239779 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-820 |
| Cow position: | chr4:16360768-16361373 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-820 |
| Cow position: | chr4:16639465-16640062 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 13 |
| Conread position: | 232-820 |
| Cow position: | chr4:26876927-26876336 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-820 |
| Cow position: | chr4:36897229-36897828 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-820 |
| Cow position: | chr4:57984840-57985443 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-820 |
| Cow position: | chr4:67682046-67682650 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 13 |
| Conread position: | 232-821 |
| Cow position: | chr4:20604582-20605132 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-821 |
| Cow position: | chr4:44726440-44727031 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 233-820 |
| Cow position: | chr4:18337708-18338306 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 12 |
| Conread position: | 233-820 |
| Cow position: | chr4:41955615-41956215 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 12 |
| Conread position: | 233-820 |
| Cow position: | chr4:41959750-41960351 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 12 |
| Conread position: | 235-420 |
| Cow position: | chr4:27294451-27294255 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 34 |
| Conread position: | 235-742 |
| Cow position: | chr4:51042438-51041918 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 24 |
| Conread position: | 238-720 |
| Cow position: | chr4:69521396-69521874 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 325 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 62, 7 |
| Conread position: | 241-555 |
| Cow position: | chr4:44924671-44924361 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 222 |
| Conread position: | 242-482 |
| Cow position: | chr4:967215-966964 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 26, 11 |
| Conread position: | 242-560 |
| Cow position: | chr4:68110169-68109847 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 49, 81 |
| Conread position: | 242-801 |
| Cow position: | chr4:45407835-45408395 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 354 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 138, 44 |
| Conread position: | 242-806 |
| Cow position: | chr4:50806379-50806931 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 355 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 43, 193 |
| Conread position: | 242-820 |
| Cow position: | chr4:17093003-17092412 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 119 |
| Conread position: | 242-820 |
| Cow position: | chr4:18423661-18423070 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 245 |
| Conread position: | 242-820 |
| Cow position: | chr4:43881968-43882557 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 11 |
| Conread position: | 245-472 |
| Cow position: | chr4:65915901-65916131 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 180 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 54, 80 |
| Conread position: | 245-507 |
| Cow position: | chr4:28832427-28832675 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 55, 75 |
| Conread position: | 245-743 |
| Cow position: | chr4:182706-183224 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 336 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 53, 220 |
| Conread position: | 245-820 |
| Cow position: | chr4:14199044-14199617 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 373 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 58, 150 |
| Conread position: | 245-820 |
| Cow position: | chr4:25598632-25598034 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 247 |
| Conread position: | 245-820 |
| Cow position: | chr4:43318775-43318184 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 214 |
| Conread position: | 245-828 |
| Cow position: | chr4:41191738-41191172 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 77 |
| Conread position: | 245-828 |
| Cow position: | chr4:42405473-42406075 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 33 |
| Conread position: | 246-821 |
| Cow position: | chr4:17925097-17924508 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 248-421 |
| Cow position: | chr4:20181912-20182080 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 102, 19 |
| Conread position: | 248-792 |
| Cow position: | chr4:9847346-9846783 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 232 |
| Conread position: | 248-820 |
| Cow position: | chr4:50975496-50976069 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 79 |
| Conread position: | 253-820 |
| Cow position: | chr4:34183753-34183226 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 374 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 46, 69 |
| Conread position: | 256-646 |
| Cow position: | chr4:4178132-4178524 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 69 |
| Conread position: | 259-820 |
| Cow position: | chr4:60263281-60262719 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 63 |
| Conread position: | 262-820 |
| Cow position: | chr4:5925961-5925406 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 359 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 32, 157 |
| Conread position: | 268-820 |
| Cow position: | chr4:9355272-9355831 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 27 |
| Conread position: | 274-819 |
| Cow position: | chr4:43672416-43672953 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 57 |
| Conread position: | 281-748 |
| Cow position: | chr4:22474250-22474710 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 31 |
| Conread position: | 281-820 |
| Cow position: | chr4:6206506-6207051 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 143 |
| Conread position: | 296-690 |
| Cow position: | chr4:39268230-39267844 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 28 |
| Conread position: | 297-695 |
| Cow position: | chr4:19252380-19252753 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 58 |
| Conread position: | 299-554 |
| Cow position: | chr4:41428233-41428488 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 93, 18 |
| Conread position: | 300-656 |
| Cow position: | chr4:9647299-9647642 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 30, 84 |
| Conread position: | 323-713 |
| Cow position: | chr4:66637569-66637169 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 253 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 16, 214 |
| Conread position: | 325-586 |
| Cow position: | chr4:14138991-14139252 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 77, 100 |
| Conread position: | 326-749 |
| Cow position: | chr4:41091485-41091069 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 29, 60 |
| Conread position: | 326-818 |
| Cow position: | chr4:10093855-10094347 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 117 |
| Conread position: | 326-819 |
| Cow position: | chr4:63428076-63427585 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 79 |
| Conread position: | 329-820 |
| Cow position: | chr4:6615168-6614674 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 321 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 11, 57 |
| Conread position: | 345-820 |
| Cow position: | chr4:50873423-50872968 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 304 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 21, 72 |
| Conread position: | 358-828 |
| Cow position: | chr4:49716771-49717239 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 16 |
| Conread position: | 360-755 |
| Cow position: | chr4:13870978-13871356 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 32 |
| Conread position: | 360-820 |
| Cow position: | chr4:13958159-13958623 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 112 |
| Conread position: | 360-820 |
| Cow position: | chr4:31638935-31638478 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 322 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 32, 83 |
| Conread position: | 360-820 |
| Cow position: | chr4:65665413-65664960 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 119 |
| Conread position: | 361-820 |
| Cow position: | chr4:38930381-38930836 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 6 |
| Conread position: | 363-792 |
| Cow position: | chr4:20067725-20067303 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 11 |
| Conread position: | 363-820 |
| Cow position: | chr4:16060252-16060731 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 33 |
| Conread position: | 367-472 |
| Cow position: | chr4:59357269-59357160 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 367-645 |
| Cow position: | chr4:42926048-42925767 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 25, 106 |
| Conread position: | 367-731 |
| Cow position: | chr4:47486305-47486675 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 8, 69 |
| Conread position: | 367-819 |
| Cow position: | chr4:12582421-12581982 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 294 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 18, 89 |
| Conread position: | 372-820 |
| Cow position: | chr4:21359228-21359684 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 13 |
| Conread position: | 373-561 |
| Cow position: | chr4:52268783-52268596 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 19, 54 |
| Conread position: | 373-820 |
| Cow position: | chr4:1952566-1952115 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 28 |
| Conread position: | 373-820 |
| Cow position: | chr4:52963125-52962684 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 319 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 19, 40 |
| Conread position: | 374-820 |
| Cow position: | chr4:33494552-33495007 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 97 |
| Conread position: | 376-643 |
| Cow position: | chr4:43003080-43002818 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 78 |
| Conread position: | 376-809 |
| Cow position: | chr4:51265735-51266157 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 49 |
| Conread position: | 376-813 |
| Cow position: | chr4:6519829-6520234 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 18 |
| Conread position: | 376-819 |
| Cow position: | chr4:22027440-22027003 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 297 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 20, 44 |
| Conread position: | 377-797 |
| Cow position: | chr4:47462824-47463242 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 286 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 82, 24 |
| Conread position: | 377-820 |
| Cow position: | chr4:6865504-6865056 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 102 |
| Conread position: | 382-820 |
| Cow position: | chr4:33596540-33596971 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 87 |
| Conread position: | 383-828 |
| Cow position: | chr4:60627854-60627416 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 385-558 |
| Cow position: | chr4:21135943-21136118 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 385-604 |
| Cow position: | chr4:2089406-2089625 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 121, 71 |
| Conread position: | 385-647 |
| Cow position: | chr4:19742906-19742652 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 172, 13 |
| Conread position: | 385-815 |
| Cow position: | chr4:46574099-46574529 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 286 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 79, 39 |
| Conread position: | 385-820 |
| Cow position: | chr4:47522371-47522800 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 85 |
| Conread position: | 389-821 |
| Cow position: | chr4:17502317-17501878 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 86 |
| Conread position: | 395-609 |
| Cow position: | chr4:58410730-58410930 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 178, 58 |
| Conread position: | 398-820 |
| Cow position: | chr4:14386844-14387274 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 77 |
| Conread position: | 398-821 |
| Cow position: | chr4:27334954-27335392 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 77 |
| Conread position: | 401-674 |
| Cow position: | chr4:39931973-39932249 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 120, 53 |
| Conread position: | 401-820 |
| Cow position: | chr4:28653466-28653043 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 74 |
| Conread position: | 414-673 |
| Cow position: | chr4:493584-493331 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 60 |
| Conread position: | 414-812 |
| Cow position: | chr4:604670-605074 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 11 |
| Conread position: | 414-820 |
| Cow position: | chr4:20236357-20235945 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 13 |
| Conread position: | 414-828 |
| Cow position: | chr4:50847858-50847443 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 55 |
| Conread position: | 427-820 |
| Cow position: | chr4:21258215-21258628 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 16, 30 |
| Conread position: | 432-820 |
| Cow position: | chr4:34221801-34222200 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 24 |
| Conread position: | 434-758 |
| Cow position: | chr4:54969771-54970097 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 14, 19 |
| Conread position: | 435-820 |
| Cow position: | chr4:3356873-3356482 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 40 |
| Conread position: | 457-820 |
| Cow position: | chr4:19094065-19094430 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 20 |
| Conread position: | 457-821 |
| Cow position: | chr4:65916359-65916715 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 20 |
| Conread position: | 458-820 |
| Cow position: | chr4:8702646-8703005 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 27, 85 |
| Conread position: | 460-654 |
| Cow position: | chr4:25735553-25735743 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 97, 16 |
| Conread position: | 469-820 |
| Cow position: | chr4:952041-952390 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 65, 18 |
| Conread position: | 488-820 |
| Cow position: | chr4:22742557-22742882 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 57 |
| Conread position: | 489-756 |
| Cow position: | chr4:11813218-11813496 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 55, 150 |
| Conread position: | 498-819 |
| Cow position: | chr4:28832840-28833165 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 54, 12 |
| Conread position: | 499-820 |
| Cow position: | chr4:41978275-41977935 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 58, 89 |
| Conread position: | 501-828 |
| Cow position: | chr4:18102534-18102192 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 7 |
| Conread position: | 505-819 |
| Cow position: | chr4:13266664-13266363 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 163, 10 |
| Conread position: | 509-809 |
| Cow position: | chr4:46200594-46200290 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 68, 43 |
| Conread position: | 510-820 |
| Cow position: | chr4:33022505-33022187 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 32, 123 |
| Conread position: | 549-799 |
| Cow position: | chr4:60045761-60045509 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 23, 77 |
| Conread position: | 550-820 |
| Cow position: | chr4:44107232-44106949 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 19, 248 |
| Conread position: | 551-731 |
| Cow position: | chr4:27851432-27851613 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 77 |
| Conread position: | 556-820 |
| Cow position: | chr4:37988527-37988788 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 31, 20 |
| Conread position: | 564-820 |
| Cow position: | chr4:827404-827660 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 114, 61 |
| Conread position: | 564-827 |
| Cow position: | chr4:44899484-44899736 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 114, 55 |
| Conread position: | 565-820 |
| Cow position: | chr4:65041433-65041183 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 111, 60 |
| Conread position: | 565-828 |
| Cow position: | chr4:11109871-11109617 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 113, 11 |
| Conread position: | 571-820 |
| Cow position: | chr4:2104833-2105075 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 40, 49 |
| Conread position: | 571-820 |
| Cow position: | chr4:17244309-17244558 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 54 |
| Conread position: | 572-820 |
| Cow position: | chr4:48028065-48028310 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 104, 53 |
| Conread position: | 576-819 |
| Cow position: | chr4:61986066-61985828 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 102, 20 |
| Conread position: | 577-808 |
| Cow position: | chr4:45297358-45297129 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 101, 48 |
| Conread position: | 579-818 |
| Cow position: | chr4:14139586-14139821 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 99, 44 |
| Conread position: | 607-820 |
| Cow position: | chr4:6267951-6267739 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 71, 6 |
| Conread position: | 624-800 |
| Cow position: | chr4:46666176-46666352 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 54, 15 |
| Conread position: | 624-820 |
| Cow position: | chr4:2089613-2089806 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 54, 22 |
| Conread position: | 624-820 |
| Cow position: | chr4:20241774-20241972 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 624-821 |
| Cow position: | chr4:12459315-12459120 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 47, 110 |
| Conread position: | 630-800 |
| Cow position: | chr4:4178642-4178810 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 48, 96 |
| Conread position: | 632-817 |
| Cow position: | chr4:1366741-1366560 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 46, 19 |
| Conread position: | 636-820 |
| Cow position: | chr4:68837731-68837545 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 640-819 |
| Cow position: | chr4:59291282-59291102 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 38, 145 |
| Conread position: | 641-828 |
| Cow position: | chr4:43867466-43867654 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 646-820 |
| Cow position: | chr4:67797627-67797455 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 29, 65 |
Show alignments to all cow chromosomes.