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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8054M19.5
        

               
Conread position:
               
225-541
               

               
Cow position:
               
chr6:46573861-46574183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
225-550
               

               
Cow position:
               
chr6:3784851-3785182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
225-555
               

               
Cow position:
               
chr6:17597223-17596892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
225-646
               

               
Cow position:
               
chr6:46603162-46602725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
225-666
               

               
Cow position:
               
chr6:50646100-50645641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
225-716
               

               
Cow position:
               
chr6:13105144-13105623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
225-746
               

               
Cow position:
               
chr6:13944993-13945529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 20
               

               
Conread position:
               
225-776
               

               
Cow position:
               
chr6:11871562-11871006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
225-820
               

               
Cow position:
               
chr6:2375771-2376367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
225-820
               

               
Cow position:
               
chr6:2877603-2876992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 21
               

               
Conread position:
               
225-820
               

               
Cow position:
               
chr6:7140259-7139648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
225-820
               

               
Cow position:
               
chr6:12665234-12664628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
225-820
               

               
Cow position:
               
chr6:26669779-26669170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
225-820
               

               
Cow position:
               
chr6:39333785-39333177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 20
               

               
Conread position:
               
225-820
               

               
Cow position:
               
chr6:40276170-40276775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
225-820
               

               
Cow position:
               
chr6:40379550-40378939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
225-820
               

               
Cow position:
               
chr6:44149473-44148856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
225-820
               

               
Cow position:
               
chr6:45587033-45587640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
225-820
               

               
Cow position:
               
chr6:65820889-65820278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
225-821
               

               
Cow position:
               
chr6:39910418-39911025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
226-731
               

               
Cow position:
               
chr6:28134003-28134512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 19
               

               
Conread position:
               
227-528
               

               
Cow position:
               
chr6:48579902-48579599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
227-622
               

               
Cow position:
               
chr6:58027760-58028156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
74, 18
               

               
Conread position:
               
227-820
               

               
Cow position:
               
chr6:10339530-10338953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
72, 18
               

               
Conread position:
               
227-820
               

               
Cow position:
               
chr6:28104774-28104171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
227-820
               

               
Cow position:
               
chr6:28169987-28170601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
227-820
               

               
Cow position:
               
chr6:58065823-58066408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 18
               

               
Conread position:
               
227-821
               

               
Cow position:
               
chr6:10644822-10645413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
228-793
               

               
Cow position:
               
chr6:43792484-43791903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 17
               

               
Conread position:
               
229-820
               

               
Cow position:
               
chr6:40326503-40327111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 16
               

               
Conread position:
               
231-465
               

               
Cow position:
               
chr6:36527392-36527639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
69, 16
               

               
Conread position:
               
231-518
               

               
Cow position:
               
chr6:14761823-14761543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 14
               

               
Conread position:
               
231-676
               

               
Cow position:
               
chr6:15278723-15278278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
73, 14
               

               
Conread position:
               
231-805
               

               
Cow position:
               
chr6:13310266-13309701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 14
               

               
Conread position:
               
231-820
               

               
Cow position:
               
chr6:7178198-7177601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
231-820
               

               
Cow position:
               
chr6:30273804-30273201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 14
               

               
Conread position:
               
231-821
               

               
Cow position:
               
chr6:66546577-66547166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 14
               

               
Conread position:
               
232-555
               

               
Cow position:
               
chr6:29312592-29312923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
232-643
               

               
Cow position:
               
chr6:17047144-17047574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
232-644
               

               
Cow position:
               
chr6:3276281-3275854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
232-647
               

               
Cow position:
               
chr6:51087032-51087458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 13
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr6:50515-49913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 13
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr6:703308-703904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr6:1535485-1534890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 13
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr6:5948692-5948086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr6:15140086-15139481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr6:20560012-20559429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr6:21973761-21974362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 13
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr6:25215295-25215907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 13
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr6:25792667-25792065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 13
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr6:35875621-35875018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr6:40553483-40552889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr6:40866233-40865634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 13
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr6:41228536-41229136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 13
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr6:55542173-55541567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr6:65842706-65843308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 10
               

               
Conread position:
               
232-820
               

               
Cow position:
               
chr6:66232899-66233492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 10
               

               
Conread position:
               
233-589
               

               
Cow position:
               
chr6:27471670-27472030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
67, 127
               

               
Conread position:
               
233-823
               

               
Cow position:
               
chr6:27170670-27171276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 89
               

               
Conread position:
               
237-820
               

               
Cow position:
               
chr6:39954960-39955539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 87
               

               
Conread position:
               
242-450
               

               
Cow position:
               
chr6:2577040-2577256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
58, 116
               

               
Conread position:
               
242-472
               

               
Cow position:
               
chr6:17244313-17244075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 209
               

               
Conread position:
               
242-528
               

               
Cow position:
               
chr6:9264188-9264481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
56, 244
               

               
Conread position:
               
242-762
               

               
Cow position:
               
chr6:16053207-16053744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 80
               

               
Conread position:
               
242-820
               

               
Cow position:
               
chr6:10250507-10249915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 126
               

               
Conread position:
               
242-820
               

               
Cow position:
               
chr6:15478273-15478863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 177
               

               
Conread position:
               
242-820
               

               
Cow position:
               
chr6:65946172-65945598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
58, 150
               

               
Conread position:
               
245-818
               

               
Cow position:
               
chr6:15926465-15925871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 163
               

               
Conread position:
               
245-820
               

               
Cow position:
               
chr6:914736-915324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 234
               

               
Conread position:
               
245-820
               

               
Cow position:
               
chr6:1821510-1820936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 135
               

               
Conread position:
               
245-820
               

               
Cow position:
               
chr6:3888403-3887825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 218
               

               
Conread position:
               
245-820
               

               
Cow position:
               
chr6:28187720-28187146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 241
               

               
Conread position:
               
245-820
               

               
Cow position:
               
chr6:28490466-28489877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 77
               

               
Conread position:
               
245-820
               

               
Cow position:
               
chr6:34891021-34890435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 239
               

               
Conread position:
               
248-799
               

               
Cow position:
               
chr6:8760189-8759625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 77
               

               
Conread position:
               
248-820
               

               
Cow position:
               
chr6:330359-329773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 66
               

               
Conread position:
               
248-820
               

               
Cow position:
               
chr6:52694127-52694718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 240
               

               
Conread position:
               
248-828
               

               
Cow position:
               
chr6:10632661-10633239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 61
               

               
Conread position:
               
251-503
               

               
Cow position:
               
chr6:60931795-60932053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
49, 228
               

               
Conread position:
               
251-571
               

               
Cow position:
               
chr6:539080-539388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 120
               

               
Conread position:
               
251-820
               

               
Cow position:
               
chr6:1382211-1381648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 71
               

               
Conread position:
               
251-828
               

               
Cow position:
               
chr6:10679538-10680112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
253-820
               

               
Cow position:
               
chr6:43618832-43619416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 69
               

               
Conread position:
               
255-820
               

               
Cow position:
               
chr6:51715640-51716225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 197
               

               
Conread position:
               
256-550
               

               
Cow position:
               
chr6:64717136-64717437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
44, 224
               

               
Conread position:
               
256-820
               

               
Cow position:
               
chr6:47042103-47041512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 385
               

               
Conread position:
               
256-820
               

               
Cow position:
               
chr6:51731194-51731773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 231
               

               
Conread position:
               
259-820
               

               
Cow position:
               
chr6:28703592-28703017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 58
               

               
Conread position:
               
261-821
               

               
Cow position:
               
chr6:58601602-58602173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 9
               

               
Conread position:
               
262-527
               

               
Cow position:
               
chr6:13316351-13316077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
35, 204
               

               
Conread position:
               
262-820
               

               
Cow position:
               
chr6:8203297-8203887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 230
               

               
Conread position:
               
262-820
               

               
Cow position:
               
chr6:9843046-9843600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 33
               

               
Conread position:
               
262-820
               

               
Cow position:
               
chr6:10609993-10610535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
38, 134
               

               
Conread position:
               
262-820
               

               
Cow position:
               
chr6:66745116-66745685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 129
               

               
Conread position:
               
262-820
               

               
Cow position:
               
chr6:67265007-67265576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 129
               

               
Conread position:
               
264-674
               

               
Cow position:
               
chr6:25360166-25360586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
35, 58
               

               
Conread position:
               
277-820
               

               
Cow position:
               
chr6:3487293-3486731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 210
               

               
Conread position:
               
281-812
               

               
Cow position:
               
chr6:6156687-6157223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
45, 18
               

               
Conread position:
               
281-820
               

               
Cow position:
               
chr6:59617249-59617782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 180
               

               
Conread position:
               
297-514
               

               
Cow position:
               
chr6:87802-88016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
33, 159
               

               
Conread position:
               
297-595
               

               
Cow position:
               
chr6:34196537-34196834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
33, 175
               

               
Conread position:
               
297-744
               

               
Cow position:
               
chr6:41166-40681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
33, 235
               

               
Conread position:
               
297-820
               

               
Cow position:
               
chr6:47048024-47047488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 184
               

               
Conread position:
               
299-820
               

               
Cow position:
               
chr6:21836012-21835506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 153
               

               
Conread position:
               
299-820
               

               
Cow position:
               
chr6:44262308-44261787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 18
               

               
Conread position:
               
299-828
               

               
Cow position:
               
chr6:40316744-40317290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 175
               

               
Conread position:
               
302-740
               

               
Cow position:
               
chr6:33899084-33898665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 132
               

               
Conread position:
               
323-666
               

               
Cow position:
               
chr6:66227120-66227450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
39, 132
               

               
Conread position:
               
324-709
               

               
Cow position:
               
chr6:68028119-68028507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
17, 137
               

               
Conread position:
               
325-654
               

               
Cow position:
               
chr6:28766854-28766514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 155
               

               
Conread position:
               
325-724
               

               
Cow position:
               
chr6:29223863-29224262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
44, 72
               

               
Conread position:
               
325-749
               

               
Cow position:
               
chr6:27333186-27333610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
218, 67
               

               
Conread position:
               
326-820
               

               
Cow position:
               
chr6:44001862-44002364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 152
               

               
Conread position:
               
329-828
               

               
Cow position:
               
chr6:3571784-3572295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 151
               

               
Conread position:
               
330-820
               

               
Cow position:
               
chr6:13848259-13848759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
335-749
               

               
Cow position:
               
chr6:13863338-13862914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
26, 13
               

               
Conread position:
               
340-822
               

               
Cow position:
               
chr6:50529681-50530148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
360-728
               

               
Cow position:
               
chr6:60375346-60374975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
77, 34
               

               
Conread position:
               
360-820
               

               
Cow position:
               
chr6:476767-477232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 33
               

               
Conread position:
               
361-565
               

               
Cow position:
               
chr6:30677060-30676868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
28, 77
               

               
Conread position:
               
361-820
               

               
Cow position:
               
chr6:3150460-3150928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 62
               

               
Conread position:
               
361-820
               

               
Cow position:
               
chr6:31199046-31199537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
31, 146
               

               
Conread position:
               
363-700
               

               
Cow position:
               
chr6:41553505-41553827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
313, 106
               

               
Conread position:
               
363-820
               

               
Cow position:
               
chr6:16591201-16591649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 94
               

               
Conread position:
               
365-729
               

               
Cow position:
               
chr6:49523416-49523788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
18, 103
               

               
Conread position:
               
373-809
               

               
Cow position:
               
chr6:12626945-12627380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
373-814
               

               
Cow position:
               
chr6:19492523-19492952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 43
               

               
Conread position:
               
374-559
               

               
Cow position:
               
chr6:64790568-64790751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
11, 95
               

               
Conread position:
               
374-652
               

               
Cow position:
               
chr6:1404076-1403792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
178, 21
               

               
Conread position:
               
374-732
               

               
Cow position:
               
chr6:20648845-20648491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
10, 22
               

               
Conread position:
               
374-748
               

               
Cow position:
               
chr6:7834737-7835106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
374-820
               

               
Cow position:
               
chr6:1410142-1409690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 21
               

               
Conread position:
               
375-767
               

               
Cow position:
               
chr6:47625303-47625701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 33
               

               
Conread position:
               
377-820
               

               
Cow position:
               
chr6:15891950-15891511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
186, 49
               

               
Conread position:
               
378-828
               

               
Cow position:
               
chr6:12533077-12533511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
126, 21
               

               
Conread position:
               
380-563
               

               
Cow position:
               
chr6:69391278-69391096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
72, 76
               

               
Conread position:
               
385-723
               

               
Cow position:
               
chr6:58004494-58004831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
144, 33
               

               
Conread position:
               
385-820
               

               
Cow position:
               
chr6:48420311-48419897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
389-820
               

               
Cow position:
               
chr6:33108189-33107769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
160, 59
               

               
Conread position:
               
390-820
               

               
Cow position:
               
chr6:6081611-6081208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
13, 40
               

               
Conread position:
               
390-821
               

               
Cow position:
               
chr6:50636128-50636564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 66
               

               
Conread position:
               
394-684
               

               
Cow position:
               
chr6:59644547-59644257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
153, 73
               

               
Conread position:
               
395-638
               

               
Cow position:
               
chr6:207504-207735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
401-819
               

               
Cow position:
               
chr6:15709984-15710390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
76, 46
               

               
Conread position:
               
406-820
               

               
Cow position:
               
chr6:1098748-1098357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
161, 50
               

               
Conread position:
               
410-820
               

               
Cow position:
               
chr6:15966527-15966113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
134, 56
               

               
Conread position:
               
413-613
               

               
Cow position:
               
chr6:16995678-16995884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
139, 54
               

               
Conread position:
               
414-820
               

               
Cow position:
               
chr6:16598894-16599311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
33, 212
               

               
Conread position:
               
420-820
               

               
Cow position:
               
chr6:5749211-5749617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 18
               

               
Conread position:
               
421-820
               

               
Cow position:
               
chr6:6185539-6185935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
123, 31
               

               
Conread position:
               
421-821
               

               
Cow position:
               
chr6:38272837-38273262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
42, 229
               

               
Conread position:
               
432-820
               

               
Cow position:
               
chr6:27528718-27528327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 10
               

               
Conread position:
               
436-821
               

               
Cow position:
               
chr6:238539-238152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
22, 64
               

               
Conread position:
               
437-800
               

               
Cow position:
               
chr6:58461016-58460649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
122, 38
               

               
Conread position:
               
444-808
               

               
Cow position:
               
chr6:42441684-42442052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 105
               

               
Conread position:
               
444-814
               

               
Cow position:
               
chr6:32416851-32417222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 150
               

               
Conread position:
               
453-820
               

               
Cow position:
               
chr6:24240717-24241097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 185
               

               
Conread position:
               
456-818
               

               
Cow position:
               
chr6:35939329-35939691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
12, 90
               

               
Conread position:
               
456-820
               

               
Cow position:
               
chr6:11723871-11723506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 19
               

               
Conread position:
               
457-820
               

               
Cow position:
               
chr6:184222-183850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 9
               

               
Conread position:
               
460-796
               

               
Cow position:
               
chr6:7159945-7160284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
94, 9
               

               
Conread position:
               
485-820
               

               
Cow position:
               
chr6:36528558-36528890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
5, 32
               

               
Conread position:
               
514-819
               

               
Cow position:
               
chr6:11165440-11165129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
50, 113
               

               
Conread position:
               
520-803
               

               
Cow position:
               
chr6:6158099-6158385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 33
               

               
Conread position:
               
545-820
               

               
Cow position:
               
chr6:61208752-61209024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
32, 24
               

               
Conread position:
               
546-806
               

               
Cow position:
               
chr6:58028144-58028405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 76
               

               
Conread position:
               
546-820
               

               
Cow position:
               
chr6:17243878-17243609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
64, 23
               

               
Conread position:
               
547-820
               

               
Cow position:
               
chr6:64717740-64718014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
129, 17
               

               
Conread position:
               
549-799
               

               
Cow position:
               
chr6:15921355-15921601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
564-820
               

               
Cow position:
               
chr6:17596859-17596603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
114, 61
               

               
Conread position:
               
564-820
               

               
Cow position:
               
chr6:57471104-57471360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 61
               

               
Conread position:
               
565-813
               

               
Cow position:
               
chr6:18973022-18972778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
113, 22
               

               
Conread position:
               
565-820
               

               
Cow position:
               
chr6:69144008-69144261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
83, 17
               

               
Conread position:
               
565-828
               

               
Cow position:
               
chr6:27375484-27375222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
111, 55
               

               
Conread position:
               
565-828
               

               
Cow position:
               
chr6:65907350-65907088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
216, 60
               

               
Conread position:
               
570-818
               

               
Cow position:
               
chr6:28475160-28475414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
27, 31
               

               
Conread position:
               
581-748
               

               
Cow position:
               
chr6:66837604-66837771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
598-820
               

               
Cow position:
               
chr6:26777697-26777477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
8, 31
               

               
Conread position:
               
607-820
               

               
Cow position:
               
chr6:14390409-14390621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
71, 6
               

               
Conread position:
               
615-818
               

               
Cow position:
               
chr6:16516050-16516256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
635-820
               

               
Cow position:
               
chr6:17047847-17048033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
643-818
               

               
Cow position:
               
chr6:7193657-7193476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 89
               

               
Conread position:
               
662-820
               

               
Cow position:
               
chr6:34136605-34136446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
679-820
               

               
Cow position:
               
chr6:50111370-50111511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.