Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8054M19.5 |
| Conread position: | 181-689 |
| Cow position: | chr9:21110500-21111017 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 329 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 43, 19 |
| Conread position: | 225-599 |
| Cow position: | chr9:46859449-46859058 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 225-788 |
| Cow position: | chr9:44384273-44384853 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 21 |
| Conread position: | 225-812 |
| Cow position: | chr9:1250987-1250384 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 225-818 |
| Cow position: | chr9:17063369-17062766 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 225-820 |
| Cow position: | chr9:779808-779200 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 225-820 |
| Cow position: | chr9:2212151-2212761 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 20 |
| Conread position: | 225-820 |
| Cow position: | chr9:6977346-6977939 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 383 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 77, 20 |
| Conread position: | 225-820 |
| Cow position: | chr9:25188115-25188711 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 14 |
| Conread position: | 225-820 |
| Cow position: | chr9:28678985-28679577 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 225-820 |
| Cow position: | chr9:30827750-30828363 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 225-820 |
| Cow position: | chr9:31065731-31066340 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 225-820 |
| Cow position: | chr9:47042972-47043582 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 225-820 |
| Cow position: | chr9:50791726-50792337 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 20 |
| Conread position: | 225-821 |
| Cow position: | chr9:51211694-51212304 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 227-495 |
| Cow position: | chr9:59447361-59447628 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 18 |
| Conread position: | 227-752 |
| Cow position: | chr9:7158932-7158387 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 18 |
| Conread position: | 227-820 |
| Cow position: | chr9:1995375-1994785 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 18 |
| Conread position: | 227-820 |
| Cow position: | chr9:17304961-17304354 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 18 |
| Conread position: | 230-669 |
| Cow position: | chr9:2497959-2497505 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 15 |
| Conread position: | 231-808 |
| Cow position: | chr9:30435591-30436170 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 14 |
| Conread position: | 231-820 |
| Cow position: | chr9:7061060-7060444 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 12 |
| Conread position: | 231-820 |
| Cow position: | chr9:37161793-37161192 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 15 |
| Conread position: | 232-541 |
| Cow position: | chr9:10322823-10323136 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-575 |
| Cow position: | chr9:16176789-16177117 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-639 |
| Cow position: | chr9:60276995-60276577 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 13 |
| Conread position: | 232-663 |
| Cow position: | chr9:47003206-47003641 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-676 |
| Cow position: | chr9:3005216-3004767 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-728 |
| Cow position: | chr9:22654596-22655109 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-749 |
| Cow position: | chr9:29627737-29627200 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 13 |
| Conread position: | 232-752 |
| Cow position: | chr9:10937615-10938146 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 13 |
| Conread position: | 232-781 |
| Cow position: | chr9:35315861-35315289 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 93 |
| Conread position: | 232-781 |
| Cow position: | chr9:42310698-42311261 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 10 |
| Conread position: | 232-786 |
| Cow position: | chr9:32969967-32970530 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 13 |
| Conread position: | 232-818 |
| Cow position: | chr9:651007-650405 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 23 |
| Conread position: | 232-818 |
| Cow position: | chr9:19158519-19157909 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 13 |
| Conread position: | 232-819 |
| Cow position: | chr9:4533514-4534115 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-819 |
| Cow position: | chr9:27783208-27783806 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-820 |
| Cow position: | chr9:6250319-6250906 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-820 |
| Cow position: | chr9:21410317-21410927 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-820 |
| Cow position: | chr9:28022826-28023421 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-820 |
| Cow position: | chr9:30673395-30674001 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 232-820 |
| Cow position: | chr9:31808597-31809197 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 13 |
| Conread position: | 232-820 |
| Cow position: | chr9:51181157-51180558 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 233-800 |
| Cow position: | chr9:221488-220936 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 12 |
| Conread position: | 233-805 |
| Cow position: | chr9:7016899-7017462 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 364 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 71, 153 |
| Conread position: | 233-820 |
| Cow position: | chr9:5004993-5005607 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 12 |
| Conread position: | 233-820 |
| Cow position: | chr9:20939340-20939931 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 12 |
| Conread position: | 234-828 |
| Cow position: | chr9:50698325-50698920 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 11 |
| Conread position: | 238-751 |
| Cow position: | chr9:28014630-28014136 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 339 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 12, 56 |
| Conread position: | 238-809 |
| Cow position: | chr9:4666207-4666786 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 7 |
| Conread position: | 238-820 |
| Cow position: | chr9:54925574-54926157 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 7 |
| Conread position: | 240-498 |
| Cow position: | chr9:26736779-26737044 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 22, 224 |
| Conread position: | 240-820 |
| Cow position: | chr9:38677172-38677766 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 5 |
| Conread position: | 242-635 |
| Cow position: | chr9:3167958-3168344 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 268 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 140, 47 |
| Conread position: | 242-676 |
| Cow position: | chr9:3963101-3962647 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 317 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 58, 184 |
| Conread position: | 242-767 |
| Cow position: | chr9:3936404-3935888 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 87 |
| Conread position: | 242-804 |
| Cow position: | chr9:26083528-26082954 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 157 |
| Conread position: | 242-820 |
| Cow position: | chr9:130135-129574 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 171 |
| Conread position: | 242-820 |
| Cow position: | chr9:27935406-27936002 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 80 |
| Conread position: | 242-820 |
| Cow position: | chr9:59428039-59428623 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 107 |
| Conread position: | 243-778 |
| Cow position: | chr9:3727632-3728169 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 82 |
| Conread position: | 245-487 |
| Cow position: | chr9:29329668-29329912 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 49, 121 |
| Conread position: | 245-643 |
| Cow position: | chr9:29027179-29026763 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 288 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 52, 242 |
| Conread position: | 245-649 |
| Cow position: | chr9:59481764-59481348 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 213 |
| Conread position: | 245-755 |
| Cow position: | chr9:1981305-1981817 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 78 |
| Conread position: | 245-820 |
| Cow position: | chr9:59537130-59537723 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 14 |
| Conread position: | 245-821 |
| Cow position: | chr9:37970175-37969586 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 175 |
| Conread position: | 248-484 |
| Cow position: | chr9:20307975-20307731 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 49, 70 |
| Conread position: | 248-701 |
| Cow position: | chr9:49303622-49303174 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 310 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 44, 77 |
| Conread position: | 248-816 |
| Cow position: | chr9:2871358-2871950 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 74 |
| Conread position: | 248-818 |
| Cow position: | chr9:13474736-13474150 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 74 |
| Conread position: | 248-820 |
| Cow position: | chr9:18508787-18508204 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 228 |
| Conread position: | 251-828 |
| Cow position: | chr9:44819186-44819763 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 29 |
| Conread position: | 252-820 |
| Cow position: | chr9:828069-827487 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 70 |
| Conread position: | 253-560 |
| Cow position: | chr9:4836301-4835990 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 200 |
| Conread position: | 255-794 |
| Cow position: | chr9:9365431-9364904 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 345 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 82 |
| Conread position: | 256-820 |
| Cow position: | chr9:9014127-9014692 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 203 |
| Conread position: | 261-748 |
| Cow position: | chr9:24980876-24980389 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 314 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 39, 168 |
| Conread position: | 262-637 |
| Cow position: | chr9:2053972-2054353 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 39, 162 |
| Conread position: | 262-805 |
| Cow position: | chr9:25034515-25033954 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 60 |
| Conread position: | 262-815 |
| Cow position: | chr9:5141761-5142314 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 92 |
| Conread position: | 262-818 |
| Cow position: | chr9:4942763-4942188 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 60 |
| Conread position: | 262-819 |
| Cow position: | chr9:30488643-30489209 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 377 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 38, 211 |
| Conread position: | 262-820 |
| Cow position: | chr9:3309671-3310236 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 59 |
| Conread position: | 262-820 |
| Cow position: | chr9:4283016-4283579 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 222 |
| Conread position: | 263-812 |
| Cow position: | chr9:25632968-25632400 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 363 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 36, 212 |
| Conread position: | 264-647 |
| Cow position: | chr9:59447568-59447956 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 247 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 78, 133 |
| Conread position: | 282-820 |
| Cow position: | chr9:25903574-25904143 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 40 |
| Conread position: | 283-818 |
| Cow position: | chr9:35595009-35594464 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 169 |
| Conread position: | 283-820 |
| Cow position: | chr9:1075119-1074554 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 370 |
| Conread position: | 295-656 |
| Cow position: | chr9:30191296-30190930 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 35, 141 |
| Conread position: | 297-735 |
| Cow position: | chr9:2866881-2866442 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 302 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 84, 34 |
| Conread position: | 297-809 |
| Cow position: | chr9:17901475-17900966 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 182 |
| Conread position: | 297-828 |
| Cow position: | chr9:20176627-20176083 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 159 |
| Conread position: | 299-820 |
| Cow position: | chr9:2679360-2679894 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 16 |
| Conread position: | 323-820 |
| Cow position: | chr9:26567719-26568217 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 113 |
| Conread position: | 324-820 |
| Cow position: | chr9:2172066-2172567 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 126 |
| Conread position: | 324-820 |
| Cow position: | chr9:9562924-9562432 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 63 |
| Conread position: | 324-820 |
| Cow position: | chr9:22436087-22436572 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 75 |
| Conread position: | 325-676 |
| Cow position: | chr9:7105312-7104951 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 108 |
| Conread position: | 326-820 |
| Cow position: | chr9:8402502-8402976 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 38 |
| Conread position: | 329-561 |
| Cow position: | chr9:22089633-22089856 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 22, 109 |
| Conread position: | 331-820 |
| Cow position: | chr9:60462785-60462318 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 321 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 61, 81 |
| Conread position: | 336-821 |
| Cow position: | chr9:25923826-25923371 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 330 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 52, 23 |
| Conread position: | 340-724 |
| Cow position: | chr9:1637997-1638380 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 267 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 191, 45 |
| Conread position: | 345-541 |
| Cow position: | chr9:32296112-32295928 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 346-701 |
| Cow position: | chr9:62736646-62736305 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 213, 36 |
| Conread position: | 359-743 |
| Cow position: | chr9:22192432-22192819 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 33, 8 |
| Conread position: | 360-676 |
| Cow position: | chr9:26553736-26554034 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 220, 35 |
| Conread position: | 360-818 |
| Cow position: | chr9:3224480-3224018 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 63 |
| Conread position: | 360-818 |
| Cow position: | chr9:7003884-7004353 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 109 |
| Conread position: | 360-820 |
| Cow position: | chr9:2210914-2211383 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 315 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 24, 7 |
| Conread position: | 363-820 |
| Cow position: | chr9:27036072-27036522 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 77 |
| Conread position: | 367-757 |
| Cow position: | chr9:9313950-9313585 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 271 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 309, 61 |
| Conread position: | 373-820 |
| Cow position: | chr9:50094073-50093615 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 106 |
| Conread position: | 374-805 |
| Cow position: | chr9:52292589-52292997 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 294 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 306, 11 |
| Conread position: | 374-820 |
| Cow position: | chr9:4717350-4717790 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 47 |
| Conread position: | 374-820 |
| Cow position: | chr9:13119127-13118686 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 297 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 37, 14 |
| Conread position: | 374-821 |
| Cow position: | chr9:9647327-9647764 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 312 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 190, 43 |
| Conread position: | 375-820 |
| Cow position: | chr9:49515307-49514863 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 304 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 29, 40 |
| Conread position: | 376-821 |
| Cow position: | chr9:45874696-45875137 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 76 |
| Conread position: | 378-781 |
| Cow position: | chr9:12912952-12913360 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 74 |
| Conread position: | 379-743 |
| Cow position: | chr9:46272297-46272670 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 250 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 9, 28 |
| Conread position: | 380-767 |
| Cow position: | chr9:46460874-46460500 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 60, 15 |
| Conread position: | 382-547 |
| Cow position: | chr9:3544059-3544220 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 385-645 |
| Cow position: | chr9:56585626-56585371 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 83, 125 |
| Conread position: | 389-802 |
| Cow position: | chr9:17069717-17069324 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 282 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 187, 45 |
| Conread position: | 395-828 |
| Cow position: | chr9:867445-867018 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 294 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 19, 76 |
| Conread position: | 404-729 |
| Cow position: | chr9:5211745-5212058 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 135, 48 |
| Conread position: | 405-819 |
| Cow position: | chr9:64015472-64015051 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 72 |
| Conread position: | 405-820 |
| Cow position: | chr9:8781708-8781306 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 20 |
| Conread position: | 410-794 |
| Cow position: | chr9:47514948-47515311 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 266, 65 |
| Conread position: | 411-781 |
| Cow position: | chr9:47545407-47545776 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 261 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 143, 45 |
| Conread position: | 435-820 |
| Cow position: | chr9:29332478-29332881 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 54 |
| Conread position: | 439-749 |
| Cow position: | chr9:60840437-60840733 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 143, 10 |
| Conread position: | 440-820 |
| Cow position: | chr9:9707365-9707740 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 262 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 121, 16 |
| Conread position: | 444-723 |
| Cow position: | chr9:9211802-9211520 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 84, 23 |
| Conread position: | 456-820 |
| Cow position: | chr9:26737165-26737543 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 273 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 94, 9 |
| Conread position: | 457-820 |
| Cow position: | chr9:26102009-26101647 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 258 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 102, 12 |
| Conread position: | 459-828 |
| Cow position: | chr9:12183166-12182792 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 98, 10 |
| Conread position: | 510-820 |
| Cow position: | chr9:4308060-4307743 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 125 |
| Conread position: | 524-818 |
| Cow position: | chr9:64026756-64027052 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 20, 104 |
| Conread position: | 545-812 |
| Cow position: | chr9:52035173-52035444 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 14, 52 |
| Conread position: | 564-820 |
| Cow position: | chr9:10976481-10976737 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 61 |
| Conread position: | 565-818 |
| Cow position: | chr9:29789321-29789068 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 113, 60 |
| Conread position: | 565-828 |
| Cow position: | chr9:28000888-28001154 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 74, 26 |
| Conread position: | 606-820 |
| Cow position: | chr9:30190910-30190690 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 72, 26 |
| Conread position: | 619-820 |
| Cow position: | chr9:56303031-56302830 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 59, 6 |
| Conread position: | 624-820 |
| Cow position: | chr9:59509736-59509539 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 625-820 |
| Cow position: | chr9:3168608-3168806 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 632-818 |
| Cow position: | chr9:32294922-32294737 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 46, 120 |
| Conread position: | 632-819 |
| Cow position: | chr9:6709391-6709579 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 635-818 |
| Cow position: | chr9:27097562-27097744 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 128, 138 |
| Conread position: | 635-820 |
| Cow position: | chr9:29044328-29044141 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 636-820 |
| Cow position: | chr9:29026486-29026303 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 42, 94 |
| Conread position: | 637-822 |
| Cow position: | chr9:7091016-7090834 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 126, 25 |
| Conread position: | 640-820 |
| Cow position: | chr9:43665107-43665289 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 642-828 |
| Cow position: | chr9:17312822-17313007 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 36, 133 |
| Conread position: | 645-828 |
| Cow position: | chr9:2000703-2000520 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 149 |
| Conread position: | 676-820 |
| Cow position: | chr9:37066334-37066482 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 93, 22 |
| Conread position: | 699-828 |
| Cow position: | chr9:29333083-29333211 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
Show alignments to all cow chromosomes.