Cow genome map

Conread name: Ss1.1-Pig4-TMW8054M19.5

Conread position: 224-820
Cow position: chrX:9009257-9009865 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 21

Conread position: 225-435
Cow position: chrX:23132887-23133104 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 75, 20

Conread position: 225-520
Cow position: chrX:7094321-7094622 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 217
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 75, 20

Conread position: 225-542
Cow position: chrX:5864313-5864636 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 236
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 73, 26

Conread position: 225-569
Cow position: chrX:8480570-8480925 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 218
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 73, 20

Conread position: 225-630
Cow position: chrX:16463396-16462980 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-643
Cow position: chrX:5335566-5335129 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-643
Cow position: chrX:12354154-12354588 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-658
Cow position: chrX:8962654-8962207 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 20

Conread position: 225-808
Cow position: chrX:7752819-7753421 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-815
Cow position: chrX:13397300-13396695 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-817
Cow position: chrX:14460443-14461034 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 20

Conread position: 225-820
Cow position: chrX:674283-673678 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position: chrX:2561940-2561327 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position: chrX:2577345-2577951 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position: chrX:2815562-2814954 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position: chrX:2858456-2857848 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position: chrX:3374989-3374380 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position: chrX:3420292-3419686 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 17

Conread position: 225-820
Cow position: chrX:3467727-3467118 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 20

Conread position: 225-820
Cow position: chrX:8589081-8589708 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position: chrX:11422790-11423400 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position: chrX:12653604-12652976 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position: chrX:12702784-12702173 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position: chrX:14784545-14783947 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position: chrX:15178517-15177907 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 20

Conread position: 225-820
Cow position: chrX:15623581-15622975 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position: chrX:15980039-15979430 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position: chrX:16362203-16361591 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position: chrX:17477505-17476891 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position: chrX:18220342-18220950 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position: chrX:18658872-18658279 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 21

Conread position: 225-820
Cow position: chrX:21341311-21341932 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 20

Conread position: 225-820
Cow position: chrX:24324654-24324036 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 20

Conread position: 225-820
Cow position: chrX:28560973-28560361 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 20

Conread position: 225-820
Cow position: chrX:28585899-28586510 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position: chrX:29935516-29936127 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 20

Conread position: 225-820
Cow position: chrX:30011918-30012528 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-820
Cow position: chrX:35530772-35531384 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-821
Cow position: chrX:17052462-17053081 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 225-831
Cow position: chrX:39563014-39562412 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 20

Conread position: 227-558
Cow position: chrX:8610780-8610447 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 234
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 70, 18

Conread position: 227-748
Cow position: chrX:46235664-46236199 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 18

Conread position: 227-756
Cow position: chrX:15486847-15486332 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 18

Conread position: 227-820
Cow position: chrX:12480915-12481525 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 18

Conread position: 228-599
Cow position: chrX:12287482-12287095 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 274
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 70, 94

Conread position: 228-748
Cow position: chrX:23040200-23039668 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 19

Conread position: 228-767
Cow position: chrX:30138653-30138101 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 13

Conread position: 228-781
Cow position: chrX:19875440-19875995 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 20

Conread position: 228-820
Cow position: chrX:5282859-5282256 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 143

Conread position: 228-820
Cow position: chrX:16276568-16277178 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 95

Conread position: 228-820
Cow position: chrX:16811522-16810918 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 17

Conread position: 228-820
Cow position: chrX:28521674-28521076 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 232

Conread position: 229-731
Cow position: chrX:20695894-20695390 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 30

Conread position: 229-820
Cow position: chrX:27425402-27424793 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 16

Conread position: 229-820
Cow position: chrX:27619210-27618607 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 16

Conread position: 229-821
Cow position: chrX:31053764-31053186 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 380
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 75, 22

Conread position: 230-788
Cow position: chrX:12314827-12314268 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 15

Conread position: 230-820
Cow position: chrX:12668826-12668218 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 15

Conread position: 230-820
Cow position: chrX:28650629-28650037 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 15

Conread position: 231-505
Cow position: chrX:13053950-13054217 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 14

Conread position: 231-781
Cow position: chrX:24476262-24475716 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 206

Conread position: 231-798
Cow position: chrX:41888070-41887493 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 15

Conread position: 231-820
Cow position: chrX:15126300-15125701 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 14

Conread position: 231-820
Cow position: chrX:26399202-26398597 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 253

Conread position: 231-820
Cow position: chrX:27593060-27592461 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 16

Conread position: 231-820
Cow position: chrX:31199488-31200085 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 14

Conread position: 232-450
Cow position: chrX:22618383-22618155 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 68, 13

Conread position: 232-616
Cow position: chrX:1834744-1835138 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 282
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 68, 13

Conread position: 232-686
Cow position: chrX:44388689-44389155 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 322
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 65, 13

Conread position: 232-799
Cow position: chrX:5296617-5296050 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 15

Conread position: 232-813
Cow position: chrX:28868319-28867720 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position: chrX:971709-972307 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position: chrX:1547905-1548509 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position: chrX:2481705-2481104 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position: chrX:11148409-11147804 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 13

Conread position: 232-820
Cow position: chrX:12343862-12344470 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 13

Conread position: 232-820
Cow position: chrX:13412207-13411601 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position: chrX:14595774-14596376 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 13

Conread position: 232-820
Cow position: chrX:18952755-18952148 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 13

Conread position: 232-820
Cow position: chrX:21830456-21831043 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position: chrX:22489070-22489685 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position: chrX:23389589-23389007 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 13

Conread position: 232-820
Cow position: chrX:23455091-23454490 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position: chrX:26528901-26529493 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position: chrX:27083893-27084502 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position: chrX:27316202-27316807 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position: chrX:29949672-29949082 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position: chrX:30068920-30068313 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 13

Conread position: 232-820
Cow position: chrX:30183010-30182399 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 232-820
Cow position: chrX:30231168-30230577 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 13

Conread position: 232-820
Cow position: chrX:32066241-32065639 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 13

Conread position: 232-820
Cow position: chrX:37813078-37813675 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 13

Conread position: 233-503
Cow position: chrX:9093500-9093779 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 67, 249

Conread position: 233-635
Cow position: chrX:45377174-45376749 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 280
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 63, 259

Conread position: 233-654
Cow position: chrX:30057976-30058410 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 302
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 60, 232

Conread position: 233-658
Cow position: chrX:29286360-29286796 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 175

Conread position: 233-818
Cow position: chrX:29910502-29909898 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 12

Conread position: 233-820
Cow position: chrX:321392-321994 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 96

Conread position: 233-820
Cow position: chrX:15600088-15600674 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 12

Conread position: 233-820
Cow position: chrX:38148522-38149120 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 253

Conread position: 235-658
Cow position: chrX:26426653-26426226 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 10

Conread position: 235-818
Cow position: chrX:30365854-30365276 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 12

Conread position: 236-781
Cow position: chrX:41102537-41101984 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 89

Conread position: 237-818
Cow position: chrX:5651705-5651148 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 8

Conread position: 238-749
Cow position: chrX:18242095-18242598 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 7

Conread position: 240-495
Cow position: chrX:10416520-10416256 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 13, 86

Conread position: 241-483
Cow position: chrX:29778577-29778327 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 167
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 220

Conread position: 241-820
Cow position: chrX:4752693-4752092 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 214

Conread position: 241-820
Cow position: chrX:29172828-29172238 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 81

Conread position: 242-514
Cow position: chrX:8574555-8574285 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 201
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 67, 217

Conread position: 242-550
Cow position: chrX:7482567-7482882 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 228
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 56, 245

Conread position: 242-689
Cow position: chrX:27390265-27389803 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 311
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 58, 78

Conread position: 242-819
Cow position: chrX:24195476-24194897 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 377
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 30, 17

Conread position: 242-819
Cow position: chrX:37015058-37015644 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 80

Conread position: 242-820
Cow position: chrX:3084202-3083609 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 80

Conread position: 242-820
Cow position: chrX:13075761-13075174 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 80

Conread position: 242-820
Cow position: chrX:13096324-13095735 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 80

Conread position: 242-820
Cow position: chrX:18451914-18452510 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 244

Conread position: 242-820
Cow position: chrX:30201796-30201208 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 159

Conread position: 242-821
Cow position: chrX:20798256-20798833 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 83

Conread position: 242-828
Cow position: chrX:36136617-36136037 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 32

Conread position: 244-589
Cow position: chrX:13182189-13181855 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 80

Conread position: 245-755
Cow position: chrX:21589931-21590444 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 75

Conread position: 245-818
Cow position: chrX:27986884-27986303 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 125

Conread position: 245-820
Cow position: chrX:6872132-6871547 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 77

Conread position: 245-820
Cow position: chrX:7031401-7031982 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 77

Conread position: 245-820
Cow position: chrX:16780230-16780811 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 43

Conread position: 245-820
Cow position: chrX:21643967-21643384 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 77

Conread position: 245-820
Cow position: chrX:24134321-24133764 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 194

Conread position: 245-820
Cow position: chrX:26757676-26757099 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 193

Conread position: 245-821
Cow position: chrX:5322789-5322198 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 75

Conread position: 245-821
Cow position: chrX:23277965-23278553 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 14

Conread position: 245-828
Cow position: chrX:29885928-29886525 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 241

Conread position: 247-597
Cow position: chrX:26578612-26578967 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 241
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 52, 184

Conread position: 248-679
Cow position: chrX:47396589-47396157 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 5

Conread position: 248-731
Cow position: chrX:15308992-15308500 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 332
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 64, 14

Conread position: 248-771
Cow position: chrX:34219253-34219773 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 74

Conread position: 248-820
Cow position: chrX:17666843-17666269 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 74

Conread position: 248-820
Cow position: chrX:27961800-27962359 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 70

Conread position: 248-820
Cow position: chrX:28626686-28626115 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 227

Conread position: 253-818
Cow position: chrX:6014004-6013446 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 127

Conread position: 256-788
Cow position: chrX:29097145-29097693 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 66

Conread position: 256-828
Cow position: chrX:30170883-30170315 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 24

Conread position: 259-819
Cow position: chrX:35386242-35385690 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 27

Conread position: 259-827
Cow position: chrX:2535117-2534547 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 224

Conread position: 261-797
Cow position: chrX:29793077-29792528 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 199

Conread position: 261-820
Cow position: chrX:5356869-5356295 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 215

Conread position: 262-567
Cow position: chrX:18553385-18553690 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 216
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 148

Conread position: 262-820
Cow position: chrX:26766245-26765669 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 223

Conread position: 263-731
Cow position: chrX:35940305-35939845 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 28

Conread position: 263-820
Cow position: chrX:17609366-17608800 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 375
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 37, 59

Conread position: 268-820
Cow position: chrX:24771902-24771333 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 54

Conread position: 270-692
Cow position: chrX:21059742-21060167 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 306
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 25, 150

Conread position: 283-685
Cow position: chrX:23072152-23072554 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 267
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 47, 127

Conread position: 294-820
Cow position: chrX:15041541-15041015 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 360
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 23

Conread position: 297-528
Cow position: chrX:35026041-35026272 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 33, 176

Conread position: 297-818
Cow position: chrX:41850205-41849697 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 20

Conread position: 297-820
Cow position: chrX:21269043-21268533 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 72

Conread position: 298-819
Cow position: chrX:16684841-16684308 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 183

Conread position: 298-820
Cow position: chrX:13447831-13447297 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 177

Conread position: 298-820
Cow position: chrX:20035406-20034872 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 183

Conread position: 299-749
Cow position: chrX:10385300-10385757 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 304
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 91, 46

Conread position: 324-617
Cow position: chrX:12294830-12295129 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 202
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 42

Conread position: 324-626
Cow position: chrX:5308721-5308422 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 204
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 79, 21

Conread position: 324-749
Cow position: chrX:23213003-23212582 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 34

Conread position: 324-799
Cow position: chrX:4330261-4329788 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 321
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 111, 26

Conread position: 324-817
Cow position: chrX:16405648-16406126 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 321
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 17, 31

Conread position: 325-561
Cow position: chrX:22128703-22128482 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 93, 0

Conread position: 325-600
Cow position: chrX:7541220-7541493 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 186
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 153

Conread position: 326-731
Cow position: chrX:30062054-30061659 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 269
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 142

Conread position: 326-799
Cow position: chrX:32330419-32330888 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 308
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 19

Conread position: 339-819
Cow position: chrX:28506231-28505741 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 73

Conread position: 340-761
Cow position: chrX:13081972-13081560 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 117

Conread position: 340-820
Cow position: chrX:28757606-28757115 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 139

Conread position: 345-653
Cow position: chrX:15144862-15144542 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 232
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 48, 125

Conread position: 345-818
Cow position: chrX:32123106-32123585 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 78

Conread position: 352-723
Cow position: chrX:25464976-25465345 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 256
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 32, 104

Conread position: 359-740
Cow position: chrX:20927241-20927632 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 262
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 16

Conread position: 360-587
Cow position: chrX:24112456-24112229 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 16, 123

Conread position: 360-809
Cow position: chrX:2892777-2892337 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 7

Conread position: 360-820
Cow position: chrX:21753368-21752913 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 38

Conread position: 360-820
Cow position: chrX:36237389-36237861 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 311
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 15, 7

Conread position: 361-623
Cow position: chrX:22816897-22817171 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 201
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 31, 121

Conread position: 362-821
Cow position: chrX:39694708-39695170 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 117

Conread position: 363-805
Cow position: chrX:26773227-26772807 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 296
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 64, 12

Conread position: 363-828
Cow position: chrX:12184009-12184477 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 114

Conread position: 365-819
Cow position: chrX:29026026-29026491 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 307
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 196, 102

Conread position: 365-820
Cow position: chrX:21580551-21581014 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 111

Conread position: 365-820
Cow position: chrX:27495778-27496242 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 107

Conread position: 365-828
Cow position: chrX:21491234-21491697 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 89

Conread position: 367-671
Cow position: chrX:3626532-3626819 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 203
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 200, 18

Conread position: 367-814
Cow position: chrX:8938694-8938234 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 293
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 25, 112

Conread position: 370-672
Cow position: chrX:38236498-38236196 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 208
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 89

Conread position: 371-820
Cow position: chrX:12667176-12667645 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 11

Conread position: 373-820
Cow position: chrX:505115-504682 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 47

Conread position: 373-820
Cow position: chrX:22567183-22566727 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 108

Conread position: 374-585
Cow position: chrX:3621383-3621595 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 20, 96

Conread position: 374-820
Cow position: chrX:19725918-19725471 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 305
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 8, 72

Conread position: 376-746
Cow position: chrX:25613136-25613502 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 254
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 81, 94

Conread position: 376-820
Cow position: chrX:38691913-38692342 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 299
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 196, 32

Conread position: 378-630
Cow position: chrX:20018958-20019220 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 14, 101

Conread position: 378-637
Cow position: chrX:12284022-12284280 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 195
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 183, 25

Conread position: 378-820
Cow position: chrX:23020379-23020824 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 92

Conread position: 384-818
Cow position: chrX:33715611-33715174 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 293
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 57

Conread position: 386-754
Cow position: chrX:17525627-17525265 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 253
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 179, 66

Conread position: 389-643
Cow position: chrX:23318816-23318573 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 148, 31

Conread position: 389-820
Cow position: chrX:13054926-13055349 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 65

Conread position: 390-781
Cow position: chrX:31510719-31511105 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 50

Conread position: 395-820
Cow position: chrX:16700797-16701220 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 60

Conread position: 404-820
Cow position: chrX:25071373-25070966 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 280
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 139, 64

Conread position: 404-820
Cow position: chrX:30070778-30071201 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 52

Conread position: 413-820
Cow position: chrX:24168930-24168526 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 276
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 146, 56

Conread position: 416-818
Cow position: chrX:2144084-2144496 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 68

Conread position: 419-820
Cow position: chrX:20333440-20333031 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 56

Conread position: 421-828
Cow position: chrX:6281657-6281246 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 31

Conread position: 426-820
Cow position: chrX:22618072-22617676 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 278
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 131, 49

Conread position: 434-782
Cow position: chrX:30130606-30130261 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 235
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 14, 91

Conread position: 435-805
Cow position: chrX:23328671-23328290 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 247
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 122, 191

Conread position: 435-820
Cow position: chrX:5393710-5393318 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 40

Conread position: 439-820
Cow position: chrX:32327300-32327687 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 270
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 43, 197

Conread position: 448-820
Cow position: chrX:37957905-37957526 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 27

Conread position: 448-828
Cow position: chrX:16861025-16860644 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 262
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 111, 15

Conread position: 452-820
Cow position: chrX:3580186-3580562 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 259
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 121, 17

Conread position: 456-820
Cow position: chrX:37850284-37850660 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 181

Conread position: 457-820
Cow position: chrX:33584533-33584912 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 253
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 97, 12

Conread position: 460-829
Cow position: chrX:16848718-16848353 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 256
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 27, 17

Conread position: 471-820
Cow position: chrX:11463876-11463518 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 18

Conread position: 480-804
Cow position: chrX:34448706-34449030 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 212
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 70, 120

Conread position: 489-820
Cow position: chrX:21224661-21225000 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 145

Conread position: 495-820
Cow position: chrX:9093836-9094172 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 235
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 64, 141

Conread position: 496-820
Cow position: chrX:30436038-30436373 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 140

Conread position: 497-801
Cow position: chrX:6249374-6249034 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 250
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 52, 0

Conread position: 501-799
Cow position: chrX:2977896-2977584 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 138

Conread position: 507-794
Cow position: chrX:18768278-18768556 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 191
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 507-819
Cow position: chrX:21316663-21316978 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 208
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 16, 66

Conread position: 513-820
Cow position: chrX:28664608-28664924 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 28

Conread position: 518-820
Cow position: chrX:45419023-45418719 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 204
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 39, 82

Conread position: 519-821
Cow position: chrX:1784794-1785092 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 203
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 53, 21

Conread position: 547-819
Cow position: chrX:23525102-23524833 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 181
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 22

Conread position: 547-820
Cow position: chrX:7094725-7094997 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 131, 29

Conread position: 547-820
Cow position: chrX:29096069-29095797 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 17

Conread position: 556-820
Cow position: chrX:12836052-12835787 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 122, 16

Conread position: 564-719
Cow position: chrX:4743763-4743609 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 565-748
Cow position: chrX:36837976-36838159 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 111, 59

Conread position: 565-781
Cow position: chrX:10414867-10414655 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 46, 60

Conread position: 565-820
Cow position: chrX:22127865-22127608 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 20

Conread position: 565-820
Cow position: chrX:43791882-43791630 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 109, 46

Conread position: 565-828
Cow position: chrX:42477541-42477279 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 113, 60

Conread position: 576-820
Cow position: chrX:24111485-24111233 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 7, 51

Conread position: 586-820
Cow position: chrX:5367855-5367625 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 92, 39

Conread position: 593-820
Cow position: chrX:27979516-27979289 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 85, 32

Conread position: 598-817
Cow position: chrX:35026283-35026498 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 80, 27

Conread position: 598-820
Cow position: chrX:3622393-3622613 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 78, 27

Conread position: 606-820
Cow position: chrX:528959-529172 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 144
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 72, 16

Conread position: 606-821
Cow position: chrX:13181250-13181015 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 183
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 72, 0

Conread position: 607-820
Cow position: chrX:1942049-1941837 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 71, 6

Conread position: 608-820
Cow position: chrX:21791931-21792143 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 70, 17

Conread position: 612-800
Cow position: chrX:16463626-16463812 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 66, 13

Conread position: 612-820
Cow position: chrX:22817384-22817586 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 66, 13

Conread position: 624-820
Cow position: chrX:11459507-11459310 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 54, 0

Conread position: 625-820
Cow position: chrX:12354856-12355051 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 53, 159

Conread position: 625-828
Cow position: chrX:29940565-29940772 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 51, 140

Conread position: 631-820
Cow position: chrX:4412196-4412384 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 103

Conread position: 633-815
Cow position: chrX:17612430-17612245 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 634-820
Cow position: chrX:45376651-45376458 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 638-821
Cow position: chrX:36072396-36072212 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 641-820
Cow position: chrX:10530440-10530261 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 94

Conread position: 647-822
Cow position: chrX:2380864-2381040 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 670-828
Cow position: chrX:33535948-33536106 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 25, 31

Show alignments to all cow chromosomes.