Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8056I09.5
        

               Conread position:
               350-876
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               330
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               30, 246
               

               Conread position:
               354-962
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               386
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               17, 67
               

               Conread position:
               355-888
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               333
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               18, 81
               

               Conread position:
               357-888
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 74
               

               Conread position:
               366-914
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               355
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               52, 13
               

               Conread position:
               368-1003
               

               Cow position:
               
               

               Alignm length:
               652
               

               Alignm identity:
               387
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               12, 26
               

               Conread position:
               369-1007
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 75
               

               Conread position:
               374-991
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               380
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               12, 16
               

               Conread position:
               376-1007
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 52
               

               Conread position:
               379-612
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               138, 124
               

               Conread position:
               379-993
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               372
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               214, 206
               

               Conread position:
               387-863
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               190, 194
               

               Conread position:
               387-972
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               350
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               123, 116
               

               Conread position:
               387-993
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               360
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               387-1007
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               387-1007
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 45
               

               Conread position:
               388-888
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               290
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               184, 205
               

               Conread position:
               391-729
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               53, 88
               

               Conread position:
               391-972
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 205
               

               Conread position:
               392-993
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               286, 294
               

               Conread position:
               392-1007
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               372
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               118, 108
               

               Conread position:
               392-1007
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 187
               

               Conread position:
               398-993
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               353
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               108, 117
               

               Conread position:
               398-1007
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 181
               

               Conread position:
               401-907
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               319
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               63, 55
               

               Conread position:
               401-972
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 16
               

               Conread position:
               409-971
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               357
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               12, 23
               

               Conread position:
               423-979
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 111
               

               Conread position:
               425-909
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               288
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               172, 5
               

               Conread position:
               426-993
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               352
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               84, 5
               

               Conread position:
               426-1005
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 76
               

               Conread position:
               434-1007
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               246, 6
               

               Conread position:
               437-888
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               276
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               170, 159
               

               Conread position:
               438-910
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 98
               

               Conread position:
               443-1003
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               333
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               215, 222
               

               Conread position:
               449-1005
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               338
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               121, 116
               

               Conread position:
               452-706
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               58, 50
               

               Conread position:
               452-791
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               41, 46
               

               Conread position:
               452-888
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               260
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               373, 381
               

               Conread position:
               452-888
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               452-888
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               259
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               20, 25
               

               Conread position:
               452-888
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               256
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               155, 144
               

               Conread position:
               452-991
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               316
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               280, 286
               

               Conread position:
               452-993
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               319
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               205, 213
               

               Conread position:
               452-993
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               328
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               58, 49
               

               Conread position:
               452-1003
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 142
               

               Conread position:
               452-1003
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               336
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               196, 202
               

               Conread position:
               464-972
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               317
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               84, 76
               

               Conread position:
               465-981
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               326
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               39, 44
               

               Conread position:
               476-993
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               311
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               212, 203
               

               Conread position:
               524-994
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 169
               

               Conread position:
               535-1006
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               283
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               51, 59
               

               Conread position:
               536-847
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               57, 51
               

               Conread position:
               536-847
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               50, 58
               

               Conread position:
               536-993
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               273
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               368, 386
               

               Conread position:
               536-1003
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               227, 69
               

               Conread position:
               536-1005
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               276
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               220, 233
               

               Conread position:
               536-1007
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               289
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               290, 314
               

               Conread position:
               553-1006
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               357, 365
               

               Conread position:
               557-833
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               102, 114
               

               Conread position:
               568-1003
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               280
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               64, 56
               

               Conread position:
               619-959
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               42, 47
               

               Conread position:
               620-1007
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               626-835
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               32, 61
               

               Conread position:
               644-1006
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               72, 64
               

               Conread position:
               690-1003
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               55, 79
               

               Conread position:
               691-945
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               61, 68
               

               Conread position:
               691-957
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               59, 17
               

               Conread position:
               691-1005
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               162, 156
               

               Conread position:
               692-1004
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               49, 56
               

               Conread position:
               704-993
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               50, 55
               

               Conread position:
               766-1007
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               15, 23
               

               Conread position:
               776-1006
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               135, 145
               
Show alignments to all cow chromosomes.