Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8059M19.5 |
| Conread position: | 1-255 |
| Cow position: | chr11:9734267-9734016 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 95, 61 |
| Conread position: | 1-403 |
| Cow position: | chr11:15696134-15695714 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 278 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 99, 11 |
| Conread position: | 1-420 |
| Cow position: | chr11:53681819-53682264 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 55 |
| Conread position: | 1-431 |
| Cow position: | chr11:38835029-38834584 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 74, 58 |
| Conread position: | 2-403 |
| Cow position: | chr11:16985911-16985511 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 251 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 7, 55 |
| Conread position: | 2-403 |
| Cow position: | chr11:19102089-19101670 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 94, 57 |
| Conread position: | 2-403 |
| Cow position: | chr11:24393726-24394138 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 259 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 114, 57 |
| Conread position: | 2-403 |
| Cow position: | chr11:26124520-26124102 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 105, 57 |
| Conread position: | 2-403 |
| Cow position: | chr11:41170289-41169869 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 105, 57 |
| Conread position: | 2-403 |
| Cow position: | chr11:43514226-43513807 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 270 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 81, 57 |
| Conread position: | 2-403 |
| Cow position: | chr11:58134800-58135221 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 94, 57 |
| Conread position: | 2-414 |
| Cow position: | chr11:10303413-10303828 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 94, 21 |
| Conread position: | 3-257 |
| Cow position: | chr11:53116491-53116234 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 93, 13 |
| Conread position: | 3-402 |
| Cow position: | chr11:46724291-46723880 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 261 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 93, 48 |
| Conread position: | 3-403 |
| Cow position: | chr11:29668201-29667781 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 270 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 100, 56 |
| Conread position: | 5-257 |
| Cow position: | chr11:9763336-9763084 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 91, 31 |
| Conread position: | 23-434 |
| Cow position: | chr11:47759856-47759426 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 84, 36 |
| Conread position: | 24-255 |
| Cow position: | chr11:58834347-58834579 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 65, 33 |
| Conread position: | 28-403 |
| Cow position: | chr11:17326811-17327186 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 209, 21 |
| Conread position: | 30-402 |
| Cow position: | chr11:35504981-35504598 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 82, 27 |
| Conread position: | 33-285 |
| Cow position: | chr11:44013043-44013293 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 26 |
| Conread position: | 44-351 |
| Cow position: | chr11:73462833-73462519 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 52, 12 |
| Conread position: | 74-297 |
| Cow position: | chr11:84515806-84515569 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 8 |
| Conread position: | 83-395 |
| Cow position: | chr11:2906159-2905821 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 236 |
| Conread position: | 99-254 |
| Cow position: | chr11:80792482-80792325 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 28, 141 |
| Conread position: | 108-420 |
| Cow position: | chr11:43070810-43070483 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 110-253 |
| Cow position: | chr11:4027042-4026898 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 128-260 |
| Cow position: | chr11:53431522-53431388 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 110, 0 |
Show alignments to all cow chromosomes.