Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8059M19.5 |
| Conread position: | 1-251 |
| Cow position: | chr15:444955-445210 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 15 |
| Conread position: | 2-259 |
| Cow position: | chr15:4961989-4962248 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 94, 57 |
| Conread position: | 2-264 |
| Cow position: | chr15:4386111-4386378 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 105, 57 |
| Conread position: | 2-264 |
| Cow position: | chr15:21665394-21665128 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 105, 57 |
| Conread position: | 2-351 |
| Cow position: | chr15:14609281-14608937 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 27, 35 |
| Conread position: | 2-357 |
| Cow position: | chr15:53136869-53136502 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 105, 57 |
| Conread position: | 2-403 |
| Cow position: | chr15:8811673-8811255 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 264 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 105, 57 |
| Conread position: | 2-403 |
| Cow position: | chr15:18577068-18577482 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 111, 40 |
| Conread position: | 2-403 |
| Cow position: | chr15:19737699-19737285 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 268 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 52, 58 |
| Conread position: | 2-418 |
| Cow position: | chr15:18332475-18332044 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 270 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 109, 60 |
| Conread position: | 3-403 |
| Cow position: | chr15:5207246-5207659 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 96, 54 |
| Conread position: | 5-260 |
| Cow position: | chr15:47772506-47772762 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 90, 44 |
| Conread position: | 17-403 |
| Cow position: | chr15:23310761-23310367 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 83, 42 |
| Conread position: | 58-253 |
| Cow position: | chr15:47335238-47335040 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 42, 23 |
| Conread position: | 70-238 |
| Cow position: | chr15:34367275-34367101 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 74-401 |
| Cow position: | chr15:2140696-2140355 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 22, 15 |
| Conread position: | 75-403 |
| Cow position: | chr15:35833846-35834186 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 29, 57 |
| Conread position: | 75-432 |
| Cow position: | chr15:18069085-18068706 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 249 |
| Conread position: | 98-401 |
| Cow position: | chr15:2145326-2145641 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 17, 180 |
| Conread position: | 100-412 |
| Cow position: | chr15:33798045-33797735 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 141, 17 |
| Conread position: | 103-257 |
| Cow position: | chr15:19232762-19232609 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 134, 10 |
| Conread position: | 114-266 |
| Cow position: | chr15:18258416-18258263 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 114-351 |
| Cow position: | chr15:33494099-33494341 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 152, 119 |
| Conread position: | 138-425 |
| Cow position: | chr15:40331057-40330761 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 75, 14 |
| Conread position: | 152-475 |
| Cow position: | chr15:20442276-20441946 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 87, 157 |
Show alignments to all cow chromosomes.