Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8059M19.5
        

               Conread position:
               1-249
               

               Cow position:
               chr17:30673154-30672911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 39
               

               Conread position:
               1-345
               

               Cow position:
               chr17:15436371-15436726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               95, 58
               

               Conread position:
               2-238
               

               Cow position:
               chr17:33831100-33831339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               94, 53
               

               Conread position:
               2-264
               

               Cow position:
               chr17:11087142-11086875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               10, 15
               

               Conread position:
               2-403
               

               Cow position:
               chr17:19268249-19267830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               272
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               93, 57
               

               Conread position:
               2-454
               

               Cow position:
               chr17:24029424-24028942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               314
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               105, 57
               

               Conread position:
               3-351
               

               Cow position:
               chr17:32297546-32297190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               97, 58
               

               Conread position:
               3-352
               

               Cow position:
               chr17:14910884-14910530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               91, 29
               

               Conread position:
               14-202
               

               Cow position:
               chr17:31951423-31951228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               38, 69
               

               Conread position:
               110-255
               

               Cow position:
               chr17:4653752-4653606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               5, 89
               

               Conread position:
               131-402
               

               Cow position:
               chr17:6069267-6069551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               109, 179
               
Show alignments to all cow chromosomes.