Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8059M19.5 |
| Conread position: | 1-198 |
| Cow position: | chr21:18169438-18169242 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 95, 58 |
| Conread position: | 1-351 |
| Cow position: | chr21:37590519-37590165 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 99, 55 |
| Conread position: | 2-260 |
| Cow position: | chr21:1689294-1689030 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 2-264 |
| Cow position: | chr21:146796-147063 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 105, 57 |
| Conread position: | 2-264 |
| Cow position: | chr21:4077703-4077967 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 100, 34 |
| Conread position: | 2-264 |
| Cow position: | chr21:5840397-5840130 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 105, 57 |
| Conread position: | 2-403 |
| Cow position: | chr21:1192627-1193039 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 10, 15 |
| Conread position: | 2-403 |
| Cow position: | chr21:35144629-35145043 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 265 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 111, 57 |
| Conread position: | 3-194 |
| Cow position: | chr21:4275301-4275109 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 23, 29 |
| Conread position: | 3-403 |
| Cow position: | chr21:30316143-30316556 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 270 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 93, 18 |
| Conread position: | 5-420 |
| Cow position: | chr21:42962535-42962130 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 235, 22 |
| Conread position: | 20-255 |
| Cow position: | chr21:45114984-45115223 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 76, 37 |
| Conread position: | 30-430 |
| Cow position: | chr21:4404649-4405055 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 275 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 65, 27 |
| Conread position: | 55-401 |
| Cow position: | chr21:45490976-45491333 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 185, 17 |
| Conread position: | 75-351 |
| Cow position: | chr21:38806368-38806095 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 79, 39 |
| Conread position: | 101-425 |
| Cow position: | chr21:16693198-16693532 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 14, 209 |
| Conread position: | 126-403 |
| Cow position: | chr21:26402493-26402206 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 112, 184 |
Show alignments to all cow chromosomes.