Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8061D03.3
        

               Conread position:
               1-317
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               137, 144
               

               Conread position:
               1-318
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-329
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               215, 229
               

               Conread position:
               1-335
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               71, 65
               

               Conread position:
               1-344
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               137, 144
               

               Conread position:
               1-376
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               49, 61
               

               Conread position:
               1-417
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               272
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               117, 111
               

               Conread position:
               1-419
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 206
               

               Conread position:
               1-424
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               275
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               48, 59
               

               Conread position:
               1-459
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               274
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-459
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               281
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               132, 141
               

               Conread position:
               1-462
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 281
               

               Conread position:
               1-495
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               287
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               224, 229
               

               Conread position:
               1-503
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 141
               

               Conread position:
               1-530
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               319
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               262, 116
               

               Conread position:
               1-530
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 201
               

               Conread position:
               1-580
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 229
               

               Conread position:
               1-587
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 109
               

               Conread position:
               1-623
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 136
               

               Conread position:
               1-623
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               364
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               284, 276
               

               Conread position:
               1-624
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               564, 552
               

               Conread position:
               1-624
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 43
               

               Conread position:
               1-637
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               372
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               48, 62
               

               Conread position:
               1-637
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 141
               

               Conread position:
               1-657
               

               Cow position:
               
               

               Alignm length:
               660
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 277
               

               Conread position:
               1-686
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               393
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               130, 157
               

               Conread position:
               1-686
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               398
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               133, 157
               

               Conread position:
               1-688
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               409
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               132, 136
               

               Conread position:
               1-709
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               415
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               221, 229
               

               Conread position:
               1-710
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               407
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               274, 268
               

               Conread position:
               1-710
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 138
               

               Conread position:
               1-710
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 27
               

               Conread position:
               1-713
               

               Cow position:
               
               

               Alignm length:
               717
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 46
               

               Conread position:
               1-714
               

               Cow position:
               
               

               Alignm length:
               717
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 229
               

               Conread position:
               1-714
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               414
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               543, 547
               

               Conread position:
               1-714
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               641, 649
               

               Conread position:
               1-714
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               453, 445
               

               Conread position:
               1-723
               

               Cow position:
               
               

               Alignm length:
               728
               

               Alignm identity:
               432
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               130, 145
               

               Conread position:
               1-725
               

               Cow position:
               
               

               Alignm length:
               730
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               311, 304
               

               Conread position:
               1-725
               

               Cow position:
               
               

               Alignm length:
               730
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               493, 469
               

               Conread position:
               1-726
               

               Cow position:
               
               

               Alignm length:
               728
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               286, 279
               

               Conread position:
               1-728
               

               Cow position:
               
               

               Alignm length:
               738
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 41
               

               Conread position:
               1-735
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               258, 262
               

               Conread position:
               1-741
               

               Cow position:
               
               

               Alignm length:
               746
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 132
               

               Conread position:
               1-741
               

               Cow position:
               
               

               Alignm length:
               747
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 145
               

               Conread position:
               1-743
               

               Cow position:
               
               

               Alignm length:
               748
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 201
               

               Conread position:
               3-402
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 139
               

               Conread position:
               3-457
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-530
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               3-711
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               3-715
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 27
               

               Conread position:
               3-735
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 227
               

               Conread position:
               3-741
               

               Cow position:
               
               

               Alignm length:
               747
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 14
               

               Conread position:
               3-743
               

               Cow position:
               
               

               Alignm length:
               744
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               283, 275
               

               Conread position:
               3-743
               

               Cow position:
               
               

               Alignm length:
               744
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 205
               

               Conread position:
               4-743
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               540, 531
               

               Conread position:
               5-722
               

               Cow position:
               
               

               Alignm length:
               726
               

               Alignm identity:
               428
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               44, 58
               

               Conread position:
               7-628
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 21
               

               Conread position:
               8-680
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               397
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               69, 86
               

               Conread position:
               13-456
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 31
               

               Conread position:
               17-459
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               269
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               32, 40
               

               Conread position:
               17-623
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               358
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               205, 213
               

               Conread position:
               17-715
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               422
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               32, 57
               

               Conread position:
               19-579
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               342
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               18, 11
               

               Conread position:
               19-623
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               353
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               114, 129
               

               Conread position:
               19-710
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               406
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               43, 20
               

               Conread position:
               19-735
               

               Cow position:
               
               

               Alignm length:
               720
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               352, 345
               

               Conread position:
               19-743
               

               Cow position:
               
               

               Alignm length:
               728
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               351, 343
               

               Conread position:
               21-636
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 295
               

               Conread position:
               22-708
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               643, 650
               

               Conread position:
               33-714
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 197
               

               Conread position:
               41-456
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               106, 102
               

               Conread position:
               52-383
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               81, 85
               

               Conread position:
               52-675
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               386
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               18, 33
               

               Conread position:
               52-751
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 228
               

               Conread position:
               55-735
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 223
               

               Conread position:
               60-641
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               343
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               162, 170
               

               Conread position:
               61-709
               

               Cow position:
               
               

               Alignm length:
               655
               

               Alignm identity:
               380
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               78, 85
               

               Conread position:
               61-730
               

               Cow position:
               
               

               Alignm length:
               675
               

               Alignm identity:
               393
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               64, 74
               

               Conread position:
               73-707
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               362
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               226, 221
               

               Conread position:
               81-707
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 233
               

               Conread position:
               81-743
               

               Cow position:
               
               

               Alignm length:
               667
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 200
               

               Conread position:
               82-508
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               286
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               64, 59
               

               Conread position:
               82-710
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               382
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               225, 232
               

               Conread position:
               82-714
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               384
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               56, 30
               

               Conread position:
               85-743
               

               Cow position:
               
               

               Alignm length:
               664
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 38
               

               Conread position:
               97-743
               

               Cow position:
               
               

               Alignm length:
               650
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 169
               

               Conread position:
               144-457
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               79, 86
               

               Conread position:
               145-743
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 217
               

               Conread position:
               156-741
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 125
               

               Conread position:
               157-708
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               327
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               61, 69
               

               Conread position:
               159-714
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               332
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               222, 227
               

               Conread position:
               163-735
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               343
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               60, 67
               

               Conread position:
               171-743
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 124
               

               Conread position:
               225-743
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               313
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               17, 10
               

               Conread position:
               309-735
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               28, 40
               

               Conread position:
               331-744
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               249
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               123, 115
               
Show alignments to all cow chromosomes.