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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8061D03.3
        

               
Conread position:
               
1-258
               

               
Cow position:
               
chr18:1418344-1418601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr18:49022988-49023305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
124, 112
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr18:50282016-50282346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
116, 121
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr18:50246503-50246839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
262, 254
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr18:42792566-42792904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
323, 0
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr18:56267454-56267113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
34, 29
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr18:56329173-56328821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 229
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr18:56391257-56390856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
224, 229
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr18:49032452-49032049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
144, 140
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr18:50083876-50084281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
336, 348
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr18:56329257-56328841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 111
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr18:49022820-49023242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
103, 107
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr18:42724330-42723907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
56, 62
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:42675231-42674785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
36, 27
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr18:42837678-42837225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
225, 229
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr18:49022736-49023190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
145, 131
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr18:55066936-55066480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
45, 78
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr18:56247555-56247107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr18:52447870-52448331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
145, 140
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr18:52012017-52011554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
1-475
               

               
Cow position:
               
chr18:50281848-50282322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
281, 291
               

               
Conread position:
               
1-476
               

               
Cow position:
               
chr18:43168050-43168525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
37, 30
               

               
Conread position:
               
1-476
               

               
Cow position:
               
chr18:50058861-50058388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
118, 111
               

               
Conread position:
               
1-479
               

               
Cow position:
               
chr18:53610209-53609730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
298, 293
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr18:55497532-55497029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr18:40075197-40075703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 75
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:42827410-42827921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
286, 280
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:51400622-51401139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
285, 276
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr18:51400538-51401067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
118, 111
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr18:56391509-56390980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 140
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr18:50271635-50272164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
52, 45
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr18:1418008-1418558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 114
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr18:42724498-42723947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
138, 145
               

               
Conread position:
               
1-552
               

               
Cow position:
               
chr18:40306763-40307314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
118, 112
               

               
Conread position:
               
1-568
               

               
Cow position:
               
chr18:50295362-50295928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
129, 137
               

               
Conread position:
               
1-579
               

               
Cow position:
               
chr18:55497616-55497038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
221, 216
               

               
Conread position:
               
1-623
               

               
Cow position:
               
chr18:33064260-33063638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
49, 62
               

               
Conread position:
               
1-625
               

               
Cow position:
               
chr18:33093100-33092476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
259, 263
               

               
Conread position:
               
1-636
               

               
Cow position:
               
chr18:50848845-50849480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
224, 229
               

               
Conread position:
               
1-641
               

               
Cow position:
               
chr18:51789383-51788743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
312, 306
               

               
Conread position:
               
1-642
               

               
Cow position:
               
chr18:53560184-53560821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
526, 521
               

               
Conread position:
               
1-651
               

               
Cow position:
               
chr18:50246167-50246817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 112
               

               
Conread position:
               
1-662
               

               
Cow position:
               
chr18:56329509-56328848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
665
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 136
               

               
Conread position:
               
1-668
               

               
Cow position:
               
chr18:56316307-56316976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
370, 364
               

               
Conread position:
               
1-670
               

               
Cow position:
               
chr18:41198085-41198755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
336, 349
               

               
Conread position:
               
1-674
               

               
Cow position:
               
chr18:50031060-50030389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
118, 114
               

               
Conread position:
               
1-680
               

               
Cow position:
               
chr18:50059113-50058436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
137, 132
               

               
Conread position:
               
1-682
               

               
Cow position:
               
chr18:14454014-14453330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
48, 62
               

               
Conread position:
               
1-686
               

               
Cow position:
               
chr18:50848677-50849362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
132, 144
               

               
Conread position:
               
1-686
               

               
Cow position:
               
chr18:53610461-53609776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
634, 615
               

               
Conread position:
               
1-688
               

               
Cow position:
               
chr18:50246083-50246770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 348
               

               
Conread position:
               
1-698
               

               
Cow position:
               
chr18:49032788-49032091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 29
               

               
Conread position:
               
1-707
               

               
Cow position:
               
chr18:33064512-33063806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
49, 62
               

               
Conread position:
               
1-707
               

               
Cow position:
               
chr18:43093664-43092958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
39, 57
               

               
Conread position:
               
1-707
               

               
Cow position:
               
chr18:55523398-55524104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
145, 141
               

               
Conread position:
               
1-708
               

               
Cow position:
               
chr18:33064848-33064142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
225, 207
               

               
Conread position:
               
1-708
               

               
Cow position:
               
chr18:42675315-42674609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
120, 111
               

               
Conread position:
               
1-708
               

               
Cow position:
               
chr18:50083540-50084246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 75
               

               
Conread position:
               
1-713
               

               
Cow position:
               
chr18:40306595-40307307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
120, 114
               

               
Conread position:
               
1-713
               

               
Cow position:
               
chr18:52447030-52447742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
48, 62
               

               
Conread position:
               
1-715
               

               
Cow position:
               
chr18:41197749-41198463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
542, 547
               

               
Conread position:
               
1-715
               

               
Cow position:
               
chr18:49033124-49032410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 229
               

               
Conread position:
               
1-716
               

               
Cow position:
               
chr18:49033292-49032577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 29
               

               
Conread position:
               
1-717
               

               
Cow position:
               
chr18:42792146-42792862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
551, 567
               

               
Conread position:
               
1-717
               

               
Cow position:
               
chr18:50083372-50084088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 31
               

               
Conread position:
               
1-720
               

               
Cow position:
               
chr18:42694042-42693323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
663, 671
               

               
Conread position:
               
1-723
               

               
Cow position:
               
chr18:42791138-42791860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
220, 216
               

               
Conread position:
               
1-725
               

               
Cow position:
               
chr18:44398265-44397541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
48, 82
               

               
Conread position:
               
1-725
               

               
Cow position:
               
chr18:56316223-56316947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 54
               

               
Conread position:
               
1-726
               

               
Cow position:
               
chr18:42791978-42792703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 29
               

               
Conread position:
               
1-726
               

               
Cow position:
               
chr18:50059449-50058724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 265
               

               
Conread position:
               
1-726
               

               
Cow position:
               
chr18:56128463-56129187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 27
               

               
Conread position:
               
1-727
               

               
Cow position:
               
chr18:42791054-42791780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 29
               

               
Conread position:
               
1-727
               

               
Cow position:
               
chr18:49032872-49032146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 115
               

               
Conread position:
               
1-727
               

               
Cow position:
               
chr18:50059533-50058807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 114
               

               
Conread position:
               
1-733
               

               
Cow position:
               
chr18:53635702-53634971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 27
               

               
Conread position:
               
1-734
               

               
Cow position:
               
chr18:56128295-56129028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
671, 663
               

               
Conread position:
               
1-735
               

               
Cow position:
               
chr18:43167714-43168448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
454, 448
               

               
Conread position:
               
1-735
               

               
Cow position:
               
chr18:53635870-53635136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
671, 663
               

               
Conread position:
               
1-735
               

               
Cow position:
               
chr18:53636038-53635304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
740
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 136
               

               
Conread position:
               
1-735
               

               
Cow position:
               
chr18:56128127-56128861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 56
               

               
Conread position:
               
1-736
               

               
Cow position:
               
chr18:56330013-56329280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
741
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 279
               

               
Conread position:
               
1-737
               

               
Cow position:
               
chr18:52012353-52011622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 229
               

               
Conread position:
               
1-742
               

               
Cow position:
               
chr18:42693706-42692965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
536, 477
               

               
Conread position:
               
1-742
               

               
Cow position:
               
chr18:42693874-42693134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 136
               

               
Conread position:
               
1-742
               

               
Cow position:
               
chr18:56330181-56329440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
453, 445
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr18:40306343-40307085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
118, 109
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr18:41197581-41198323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
120, 114
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr18:43093580-43092838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
313, 308
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr18:49032956-49032214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
750
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 54
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr18:49033208-49032466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 281
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr18:53635954-53635212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr18:56316139-56316881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
82, 75
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr18:56329677-56328935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 112
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr18:56329845-56329103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 229
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr18:56329929-56329187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 135
               

               
Conread position:
               
1-751
               

               
Cow position:
               
chr18:56329761-56329011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
760
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr18:56494272-56494541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 60
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr18:53526036-53526455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 30
               

               
Conread position:
               
3-456
               

               
Cow position:
               
chr18:56391339-56390886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
3-539
               

               
Cow position:
               
chr18:56391423-56390887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
143, 138
               

               
Conread position:
               
3-687
               

               
Cow position:
               
chr18:53586655-53585971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 110
               

               
Conread position:
               
3-717
               

               
Cow position:
               
chr18:53559934-53560648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 214
               

               
Conread position:
               
3-726
               

               
Cow position:
               
chr18:53586739-53586018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 196
               

               
Conread position:
               
3-743
               

               
Cow position:
               
chr18:42693788-42693049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
743
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 134
               

               
Conread position:
               
3-743
               

               
Cow position:
               
chr18:56128213-56128953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 23
               

               
Conread position:
               
4-342
               

               
Cow position:
               
chr18:1418263-1418601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-440
               

               
Cow position:
               
chr18:51839216-51838780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 38
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr18:53525953-53526432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
129, 109
               

               
Conread position:
               
4-643
               

               
Cow position:
               
chr18:41948919-41948282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 59
               

               
Conread position:
               
4-656
               

               
Cow position:
               
chr18:51400457-51401109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
114, 108
               

               
Conread position:
               
4-689
               

               
Cow position:
               
chr18:55523569-55524254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
32, 41
               

               
Conread position:
               
4-715
               

               
Cow position:
               
chr18:56391590-56390879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 226
               

               
Conread position:
               
5-716
               

               
Cow position:
               
chr18:50099321-50100032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 42
               

               
Conread position:
               
6-624
               

               
Cow position:
               
chr18:50848514-50849131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 259
               

               
Conread position:
               
6-679
               

               
Cow position:
               
chr18:55497695-55497020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 24
               

               
Conread position:
               
6-698
               

               
Cow position:
               
chr18:50059612-50058920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
449, 439
               

               
Conread position:
               
7-706
               

               
Cow position:
               
chr18:53586903-53586204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 33
               

               
Conread position:
               
7-743
               

               
Cow position:
               
chr18:50083462-50084198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 69
               

               
Conread position:
               
12-327
               

               
Cow position:
               
chr18:56391969-56391654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
18, 23
               

               
Conread position:
               
12-737
               

               
Cow position:
               
chr18:56493774-56494502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 221
               

               
Conread position:
               
13-411
               

               
Cow position:
               
chr18:43168146-43168544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
22, 17
               

               
Conread position:
               
13-415
               

               
Cow position:
               
chr18:50281944-50282346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
183, 196
               

               
Conread position:
               
13-458
               

               
Cow position:
               
chr18:33064080-33063635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
217, 195
               

               
Conread position:
               
13-527
               

               
Cow position:
               
chr18:42693442-42692928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 213
               

               
Conread position:
               
13-605
               

               
Cow position:
               
chr18:55523746-55524338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
115, 102
               

               
Conread position:
               
13-636
               

               
Cow position:
               
chr18:51812530-51811907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
13-642
               

               
Cow position:
               
chr18:50281692-50282321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 128
               

               
Conread position:
               
13-663
               

               
Cow position:
               
chr18:42792242-42792892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
654
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
70, 63
               

               
Conread position:
               
13-666
               

               
Cow position:
               
chr18:40306691-40307346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
44, 50
               

               
Conread position:
               
13-686
               

               
Cow position:
               
chr18:55523662-55524335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
208, 188
               

               
Conread position:
               
13-688
               

               
Cow position:
               
chr18:56128055-56128730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 16
               

               
Conread position:
               
13-688
               

               
Cow position:
               
chr18:56128391-56129066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
459, 447
               

               
Conread position:
               
13-708
               

               
Cow position:
               
chr18:42791318-42792012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
70, 63
               

               
Conread position:
               
13-708
               

               
Cow position:
               
chr18:44398421-44397727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
106, 102
               

               
Conread position:
               
13-710
               

               
Cow position:
               
chr18:53525710-53526407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
250, 242
               

               
Conread position:
               
13-713
               

               
Cow position:
               
chr18:53636110-53635410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 50
               

               
Conread position:
               
13-717
               

               
Cow position:
               
chr18:50098993-50099697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 63
               

               
Conread position:
               
13-725
               

               
Cow position:
               
chr18:42693946-42693234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
490
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
652, 661
               

               
Conread position:
               
13-727
               

               
Cow position:
               
chr18:41197509-41198223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 102
               

               
Conread position:
               
13-727
               

               
Cow position:
               
chr18:41197677-41198391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
651, 661
               

               
Conread position:
               
13-727
               

               
Cow position:
               
chr18:53509256-53509970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
250, 242
               

               
Conread position:
               
13-727
               

               
Cow position:
               
chr18:53560112-53560822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
57, 70
               

               
Conread position:
               
13-727
               

               
Cow position:
               
chr18:55067092-55066378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 102
               

               
Conread position:
               
13-728
               

               
Cow position:
               
chr18:50848353-50849068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 156
               

               
Conread position:
               
13-730
               

               
Cow position:
               
chr18:40074957-40075674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
13-740
               

               
Cow position:
               
chr18:53586981-53586254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 112
               

               
Conread position:
               
13-741
               

               
Cow position:
               
chr18:53635774-53635046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-743
               

               
Cow position:
               
chr18:40306187-40306917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
110, 102
               

               
Conread position:
               
13-743
               

               
Cow position:
               
chr18:52447546-52448276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
106, 99
               

               
Conread position:
               
16-543
               

               
Cow position:
               
chr18:49022667-49023194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
16, 26
               

               
Conread position:
               
17-446
               

               
Cow position:
               
chr18:49021673-49022103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
52, 66
               

               
Conread position:
               
17-657
               

               
Cow position:
               
chr18:42724566-42723925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 309
               

               
Conread position:
               
18-716
               

               
Cow position:
               
chr18:49022419-49023115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
117, 109
               

               
Conread position:
               
19-545
               

               
Cow position:
               
chr18:50246353-50246876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
106, 115
               

               
Conread position:
               
19-708
               

               
Cow position:
               
chr18:44398331-44397643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
114, 126
               

               
Conread position:
               
19-726
               

               
Cow position:
               
chr18:43093727-43093025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 13
               

               
Conread position:
               
19-727
               

               
Cow position:
               
chr18:56330079-56329371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
352, 345
               

               
Conread position:
               
19-735
               

               
Cow position:
               
chr18:50848191-50848907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
106, 113
               

               
Conread position:
               
19-740
               

               
Cow position:
               
chr18:53559866-53560587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
49, 69
               

               
Conread position:
               
19-742
               

               
Cow position:
               
chr18:42694108-42693385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
490
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 21
               

               
Conread position:
               
19-742
               

               
Cow position:
               
chr18:56316073-56316796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 210
               

               
Conread position:
               
20-714
               

               
Cow position:
               
chr18:52447385-52448079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 43
               

               
Conread position:
               
20-741
               

               
Cow position:
               
chr18:42694191-42693470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 105
               

               
Conread position:
               
21-688
               

               
Cow position:
               
chr18:50049113-50048446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
98, 92
               

               
Conread position:
               
22-717
               

               
Cow position:
               
chr18:50848782-50849477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
111, 115
               

               
Conread position:
               
33-717
               

               
Cow position:
               
chr18:50022452-50021762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 85
               

               
Conread position:
               
34-740
               

               
Cow position:
               
chr18:50059668-50058962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
34-743
               

               
Cow position:
               
chr18:43175317-43174608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
261, 276
               

               
Conread position:
               
42-644
               

               
Cow position:
               
chr18:50083665-50084267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 70
               

               
Conread position:
               
49-748
               

               
Cow position:
               
chr18:42790936-42791634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
160, 7
               

               
Conread position:
               
51-673
               

               
Cow position:
               
chr18:1417974-1418598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 229
               

               
Conread position:
               
52-723
               

               
Cow position:
               
chr18:40324575-40323904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
95, 90
               

               
Conread position:
               
55-710
               

               
Cow position:
               
chr18:42675344-42674690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
148, 10
               

               
Conread position:
               
56-710
               

               
Cow position:
               
chr18:33064289-33063635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
170, 174
               

               
Conread position:
               
56-726
               

               
Cow position:
               
chr18:52447338-52448005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
63, 6
               

               
Conread position:
               
56-743
               

               
Cow position:
               
chr18:49033405-49032718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 89
               

               
Conread position:
               
61-424
               

               
Cow position:
               
chr18:56267478-56267113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
146, 166
               

               
Conread position:
               
61-567
               

               
Cow position:
               
chr18:50281824-50282330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 313
               

               
Conread position:
               
61-642
               

               
Cow position:
               
chr18:50295254-50295835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
22, 15
               

               
Conread position:
               
61-678
               

               
Cow position:
               
chr18:50271527-50272144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 49
               

               
Conread position:
               
61-708
               

               
Cow position:
               
chr18:49033316-49032670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
394, 388
               

               
Conread position:
               
61-708
               

               
Cow position:
               
chr18:52012377-52011731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
654
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
158, 149
               

               
Conread position:
               
61-727
               

               
Cow position:
               
chr18:50059305-50058639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
276, 289
               

               
Conread position:
               
61-743
               

               
Cow position:
               
chr18:49022294-49022974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
75, 66
               

               
Conread position:
               
73-680
               

               
Cow position:
               
chr18:53610473-53609866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 40
               

               
Conread position:
               
75-735
               

               
Cow position:
               
chr18:42724845-42724184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
8, 166
               

               
Conread position:
               
78-741
               

               
Cow position:
               
chr18:40306167-40306831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
79-743
               

               
Cow position:
               
chr18:56330187-56329523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
394, 384
               

               
Conread position:
               
80-727
               

               
Cow position:
               
chr18:43167709-43168356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
95, 115
               

               
Conread position:
               
81-641
               

               
Cow position:
               
chr18:43022565-43022005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
45, 62
               

               
Conread position:
               
81-711
               

               
Cow position:
               
chr18:33064936-33064306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
38, 31
               

               
Conread position:
               
81-715
               

               
Cow position:
               
chr18:51400282-51400916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 31
               

               
Conread position:
               
82-566
               

               
Cow position:
               
chr18:42827407-42827891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
289, 283
               

               
Conread position:
               
82-710
               

               
Cow position:
               
chr18:44184631-44184003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 59
               

               
Conread position:
               
82-713
               

               
Cow position:
               
chr18:53498314-53498943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
265, 156
               

               
Conread position:
               
82-743
               

               
Cow position:
               
chr18:42791975-42792636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
82-743
               

               
Cow position:
               
chr18:56316052-56316713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
375, 367
               

               
Conread position:
               
83-727
               

               
Cow position:
               
chr18:50281678-50282322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 32
               

               
Conread position:
               
85-569
               

               
Cow position:
               
chr18:50295362-50295846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
175, 181
               

               
Conread position:
               
85-716
               

               
Cow position:
               
chr18:50083288-50083919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
472, 468
               

               
Conread position:
               
88-703
               

               
Cow position:
               
chr18:41197500-41198115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
41, 49
               

               
Conread position:
               
88-729
               

               
Cow position:
               
chr18:50848344-50848985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
426, 450
               

               
Conread position:
               
92-712
               

               
Cow position:
               
chr18:53587070-53586450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
41, 45
               

               
Conread position:
               
96-727
               

               
Cow position:
               
chr18:56391582-56390951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
105-742
               

               
Cow position:
               
chr18:42694190-42693553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 186
               

               
Conread position:
               
107-740
               

               
Cow position:
               
chr18:50295216-50295849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
118-740
               

               
Cow position:
               
chr18:50059668-50059046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
505, 498
               

               
Conread position:
               
119-707
               

               
Cow position:
               
chr18:50098931-50099519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
111, 106
               

               
Conread position:
               
120-708
               

               
Cow position:
               
chr18:53587126-53586539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
59, 22
               

               
Conread position:
               
136-466
               

               
Cow position:
               
chr18:55442323-55442653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
146, 151
               

               
Conread position:
               
144-717
               

               
Cow position:
               
chr18:42791701-42792274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
86, 81
               

               
Conread position:
               
157-708
               

               
Cow position:
               
chr18:52012448-52011899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
61, 42
               

               
Conread position:
               
157-725
               

               
Cow position:
               
chr18:53509232-53509800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
39, 45
               

               
Conread position:
               
157-725
               

               
Cow position:
               
chr18:53525686-53526254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
60, 73
               

               
Conread position:
               
157-727
               

               
Cow position:
               
chr18:50049145-50048575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
180, 191
               

               
Conread position:
               
157-728
               

               
Cow position:
               
chr18:1417996-1418567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
214, 205
               

               
Conread position:
               
158-727
               

               
Cow position:
               
chr18:33064943-33064374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
142, 137
               

               
Conread position:
               
162-686
               

               
Cow position:
               
chr18:55523308-55523831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
163-566
               

               
Cow position:
               
chr18:14453288-14452885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 50
               

               
Conread position:
               
163-708
               

               
Cow position:
               
chr18:51400280-51400825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
137, 132
               

               
Conread position:
               
166-681
               

               
Cow position:
               
chr18:42827407-42827922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
289, 283
               

               
Conread position:
               
166-707
               

               
Cow position:
               
chr18:50271464-50272005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
64, 58
               

               
Conread position:
               
167-743
               

               
Cow position:
               
chr18:50281678-50282254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 39
               

               
Conread position:
               
168-707
               

               
Cow position:
               
chr18:33093101-33092562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
299, 291
               

               
Conread position:
               
180-743
               

               
Cow position:
               
chr18:40306186-40306749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
461, 457
               

               
Conread position:
               
190-725
               

               
Cow position:
               
chr18:44398412-44397877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
70, 82
               

               
Conread position:
               
201-688
               

               
Cow position:
               
chr18:56247775-56247296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 8
               

               
Conread position:
               
201-742
               

               
Cow position:
               
chr18:43167662-43168203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
53, 39
               

               
Conread position:
               
211-686
               

               
Cow position:
               
chr18:50281638-50282113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
211-719
               

               
Cow position:
               
chr18:50098939-50099446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
35, 53
               

               
Conread position:
               
211-726
               

               
Cow position:
               
chr18:1417966-1418479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
244, 234
               

               
Conread position:
               
220-725
               

               
Cow position:
               
chr18:41949375-41948870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
324, 329
               

               
Conread position:
               
227-727
               

               
Cow position:
               
chr18:53636064-53635564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
144, 137
               

               
Conread position:
               
227-727
               

               
Cow position:
               
chr18:56128101-56128601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
83, 87
               

               
Conread position:
               
227-735
               

               
Cow position:
               
chr18:53610487-53609979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
414, 389
               

               
Conread position:
               
229-727
               

               
Cow position:
               
chr18:50245978-50246473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
249, 6
               

               
Conread position:
               
229-743
               

               
Cow position:
               
chr18:49022712-49023226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
216, 208
               

               
Conread position:
               
246-727
               

               
Cow position:
               
chr18:56128036-56128517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
208, 200
               

               
Conread position:
               
247-740
               

               
Cow position:
               
chr18:53587083-53586590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
250-734
               

               
Cow position:
               
chr18:42827407-42827891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
94, 100
               

               
Conread position:
               
253-728
               

               
Cow position:
               
chr18:33093100-33092625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
264-708
               

               
Cow position:
               
chr18:55497689-55497246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
25, 18
               

               
Conread position:
               
264-743
               

               
Cow position:
               
chr18:55067093-55066614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
46, 50
               

               
Conread position:
               
265-712
               

               
Cow position:
               
chr18:44398421-44397974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
279, 287
               

               
Conread position:
               
287-743
               

               
Cow position:
               
chr18:50281630-50282086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
56, 61
               

               
Conread position:
               
304-740
               

               
Cow position:
               
chr18:1417975-1418411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
199, 174
               

               
Conread position:
               
330-707
               

               
Cow position:
               
chr18:53636129-53635752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
236, 232
               

               
Conread position:
               
331-743
               

               
Cow position:
               
chr18:53587083-53586671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
356-751
               

               
Cow position:
               
chr18:42694191-42693796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 104
               
Show alignments to all cow chromosomes.