Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8061D03.3 |
| Conread position: | 1-411 |
| Cow position: | chr19:23597287-23597697 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-416 |
| Cow position: | chr19:23650064-23650479 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 62 |
| Conread position: | 1-482 |
| Cow position: | chr19:23597203-23597684 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 298 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 349, 327 |
| Conread position: | 1-666 |
| Cow position: | chr19:23614446-23615111 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 385 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 136, 114 |
| Conread position: | 1-707 |
| Cow position: | chr19:20677705-20678411 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 410 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 132, 136 |
| Conread position: | 1-709 |
| Cow position: | chr19:23596954-23597659 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 419 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 215, 78 |
| Conread position: | 1-713 |
| Cow position: | chr19:20677789-20678501 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 394 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 211, 206 |
| Conread position: | 1-723 |
| Cow position: | chr19:23614026-23614748 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 413 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 34, 29 |
| Conread position: | 1-725 |
| Cow position: | chr19:14940078-14940802 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 313 |
| Conread position: | 1-725 |
| Cow position: | chr19:14940162-14940886 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 229 |
| Conread position: | 1-730 |
| Cow position: | chr19:14960135-14959422 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 420 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 550, 329 |
| Conread position: | 1-730 |
| Cow position: | chr19:23649308-23650037 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 1-734 |
| Cow position: | chr19:14940330-14941063 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 433 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 48, 62 |
| Conread position: | 1-743 |
| Cow position: | chr19:23649392-23650134 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 298, 294 |
| Conread position: | 1-743 |
| Cow position: | chr19:23649644-23650386 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 136 |
| Conread position: | 13-530 |
| Cow position: | chr19:23649908-23650425 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 307 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 212, 217 |
| Conread position: | 13-707 |
| Cow position: | chr19:20677633-20678327 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 409 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 38, 27 |
| Conread position: | 13-708 |
| Cow position: | chr19:23613870-23614564 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 393 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 105, 97 |
| Conread position: | 13-743 |
| Cow position: | chr19:23613618-23614348 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 413 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 36, 50 |
| Conread position: | 19-596 |
| Cow position: | chr19:23597137-23597714 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-743 |
| Cow position: | chr19:14940264-14940988 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 421 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 127, 123 |
| Conread position: | 22-482 |
| Cow position: | chr19:23650001-23650461 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 290 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 97, 91 |
| Conread position: | 54-707 |
| Cow position: | chr19:23649277-23649930 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 512, 500 |
| Conread position: | 61-709 |
| Cow position: | chr19:23614254-23614902 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 370 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 84, 72 |
| Conread position: | 61-740 |
| Cow position: | chr19:23596930-23597606 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 393 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 115, 103 |
| Conread position: | 65-544 |
| Cow position: | chr19:20635561-20635084 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 68, 16 |
| Conread position: | 106-743 |
| Cow position: | chr19:14940015-14940652 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 381 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 40, 36 |
| Conread position: | 124-715 |
| Cow position: | chr19:23596825-23597413 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 347 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 541, 210 |
| Conread position: | 157-743 |
| Cow position: | chr19:20635639-20635053 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 341 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 84, 78 |
| Conread position: | 158-751 |
| Cow position: | chr19:23649297-23649890 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 45 |
| Conread position: | 162-734 |
| Cow position: | chr19:14939987-14940559 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 326 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 64, 68 |
| Conread position: | 201-461 |
| Cow position: | chr19:14948428-14948169 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 109, 25 |
| Conread position: | 228-740 |
| Cow position: | chr19:23649283-23649796 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 320 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 54, 59 |
Show alignments to all cow chromosomes.