Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8061D03.3
        

               Conread position:
               1-340
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               132, 137
               

               Conread position:
               1-340
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               218
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               132, 136
               

               Conread position:
               1-376
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               132, 136
               

               Conread position:
               1-392
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               146, 125
               

               Conread position:
               1-411
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               261
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               117, 109
               

               Conread position:
               1-411
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               255
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-418
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               298, 291
               

               Conread position:
               1-418
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               284, 279
               

               Conread position:
               1-421
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               48, 62
               

               Conread position:
               1-426
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               270
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               34, 27
               

               Conread position:
               1-447
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               282
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               85, 78
               

               Conread position:
               1-457
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               453, 445
               

               Conread position:
               1-459
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               288
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               36, 29
               

               Conread position:
               1-459
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               56, 62
               

               Conread position:
               1-530
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               320
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               132, 137
               

               Conread position:
               1-539
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 199
               

               Conread position:
               1-543
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 200
               

               Conread position:
               1-567
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               346
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               118, 112
               

               Conread position:
               1-614
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 136
               

               Conread position:
               1-628
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               378
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               34, 27
               

               Conread position:
               1-637
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 62
               

               Conread position:
               1-641
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               385
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               59, 54
               

               Conread position:
               1-670
               

               Cow position:
               
               

               Alignm length:
               671
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               420, 427
               

               Conread position:
               1-688
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 228
               

               Conread position:
               1-708
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 136
               

               Conread position:
               1-708
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 216
               

               Conread position:
               1-715
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 114
               

               Conread position:
               1-727
               

               Cow position:
               
               

               Alignm length:
               732
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 277
               

               Conread position:
               1-727
               

               Cow position:
               
               

               Alignm length:
               728
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               663, 671
               

               Conread position:
               1-727
               

               Cow position:
               
               

               Alignm length:
               729
               

               Alignm identity:
               431
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               51, 41
               

               Conread position:
               1-735
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 62
               

               Conread position:
               1-738
               

               Cow position:
               
               

               Alignm length:
               744
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 200
               

               Conread position:
               1-740
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 219
               

               Conread position:
               1-743
               

               Cow position:
               
               

               Alignm length:
               746
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 136
               

               Conread position:
               1-743
               

               Cow position:
               
               

               Alignm length:
               746
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               504, 511
               

               Conread position:
               3-293
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               103, 97
               

               Conread position:
               3-372
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               212, 204
               

               Conread position:
               3-389
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               239
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               116, 17
               

               Conread position:
               3-411
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               255
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               130, 135
               

               Conread position:
               3-488
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               289
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               36, 60
               

               Conread position:
               3-545
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               338
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               25, 30
               

               Conread position:
               3-548
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               337
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               34, 25
               

               Conread position:
               3-557
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               324
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               120, 127
               

               Conread position:
               3-695
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               420
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               303, 289
               

               Conread position:
               3-710
               

               Cow position:
               
               

               Alignm length:
               713
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 197
               

               Conread position:
               3-740
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 207
               

               Conread position:
               4-319
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               36, 45
               

               Conread position:
               4-456
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               286
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               281, 276
               

               Conread position:
               4-579
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 277
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               726
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               537, 543
               

               Conread position:
               8-539
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               321
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               187, 193
               

               Conread position:
               12-381
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               183, 189
               

               Conread position:
               13-343
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               116, 124
               

               Conread position:
               13-403
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               370, 363
               

               Conread position:
               13-512
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               303
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               36, 49
               

               Conread position:
               13-670
               

               Cow position:
               
               

               Alignm length:
               661
               

               Alignm identity:
               394
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               133, 127
               

               Conread position:
               13-715
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               464, 468
               

               Conread position:
               19-551
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               318
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               19-715
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               408
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               280, 271
               

               Conread position:
               19-742
               

               Cow position:
               
               

               Alignm length:
               732
               

               Alignm identity:
               430
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               46, 65
               

               Conread position:
               22-334
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               263, 256
               

               Conread position:
               22-508
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               300
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               25, 16
               

               Conread position:
               25-557
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 35
               

               Conread position:
               32-539
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 167
               

               Conread position:
               32-710
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 38
               

               Conread position:
               33-506
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               294
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               24, 33
               

               Conread position:
               35-743
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               614, 581
               

               Conread position:
               47-663
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               406, 318
               

               Conread position:
               51-679
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 86
               

               Conread position:
               51-695
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               389
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               59-677
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               377
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               17, 12
               

               Conread position:
               61-530
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               297
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               35, 15
               

               Conread position:
               64-447
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               83, 11
               

               Conread position:
               67-504
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               430, 0
               

               Conread position:
               69-530
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               293
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               61, 56
               

               Conread position:
               76-698
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 291
               

               Conread position:
               81-688
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 33
               

               Conread position:
               82-497
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               255
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               119, 111
               

               Conread position:
               82-623
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               322
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               190, 0
               

               Conread position:
               82-713
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 148
               

               Conread position:
               83-446
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               59, 65
               

               Conread position:
               83-530
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               274
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               93, 86
               

               Conread position:
               83-743
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 54
               

               Conread position:
               84-509
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               269
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               49, 53
               

               Conread position:
               96-698
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 18
               

               Conread position:
               97-466
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               188, 181
               

               Conread position:
               105-666
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 41
               

               Conread position:
               106-483
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               90, 105
               

               Conread position:
               117-543
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               261
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               28, 24
               

               Conread position:
               129-735
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               358
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               156, 151
               

               Conread position:
               145-742
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               355
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               56, 52
               

               Conread position:
               161-686
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               335
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               128, 121
               

               Conread position:
               161-727
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               347
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               124, 117
               

               Conread position:
               162-740
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               343
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               92, 76
               

               Conread position:
               165-735
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               349
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               145, 149
               

               Conread position:
               166-742
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               352
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               79, 69
               

               Conread position:
               168-519
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               201, 196
               

               Conread position:
               180-743
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               346
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               9, 19
               

               Conread position:
               185-722
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               331
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               480, 12
               

               Conread position:
               246-717
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               286
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               295, 302
               

               Conread position:
               250-743
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               299
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               35, 30
               

               Conread position:
               253-743
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               192, 201
               

               Conread position:
               264-741
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               290
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               40, 29
               

               Conread position:
               270-743
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               291
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               68, 7
               

               Conread position:
               271-739
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               295
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               38, 42
               

               Conread position:
               349-727
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               128, 132
               

               Conread position:
               355-729
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               16, 9
               
Show alignments to all cow chromosomes.