Cow genome map

Conread name: Ss1.1-Pig4-TMW8063D21.3

Conread position: 808-1034
Cow position: chr1:43703463-43703250 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 74

Conread position: 810-1026
Cow position: chr1:60281424-60281222 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 160, 71

Conread position: 811-980
Cow position: chr1:22394853-22394687 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 159, 65

Conread position: 816-980
Cow position: chr1:32001269-32001429 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 98, 11

Conread position: 816-1010
Cow position: chr1:53369257-53369072 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 38, 11

Conread position: 816-1010
Cow position: chr1:85596990-85596805 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 66

Conread position: 820-1009
Cow position: chr1:100512651-100512463 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 62

Conread position: 821-981
Cow position: chr1:56477632-56477478 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 149, 60

Conread position: 821-1009
Cow position: chr1:42545739-42545919 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 149, 60

Conread position: 821-1017
Cow position: chr1:6788243-6788426 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 149, 60

Conread position: 822-967
Cow position: chr1:71796271-71796408 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 822-980
Cow position: chr1:5637020-5637184 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 822-980
Cow position: chr1:36875069-36874906 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 822-981
Cow position: chr1:92996852-92997005 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 148, 59

Conread position: 822-988
Cow position: chr1:34771464-34771620 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 148, 59

Conread position: 822-1001
Cow position: chr1:15333934-15333755 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 145, 80

Conread position: 822-1002
Cow position: chr1:53374472-53374305 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 148, 40

Conread position: 822-1004
Cow position: chr1:87095175-87095358 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 68

Conread position: 822-1004
Cow position: chr1:98413811-98413639 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 822-1009
Cow position: chr1:43872280-43872463 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 148, 161

Conread position: 822-1010
Cow position: chr1:4032671-4032492 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 148, 59

Conread position: 822-1010
Cow position: chr1:4291206-4291025 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 60

Conread position: 822-1010
Cow position: chr1:4374298-4374472 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 87, 59

Conread position: 822-1010
Cow position: chr1:16060965-16061154 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 55, 70

Conread position: 822-1010
Cow position: chr1:31607849-31608030 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 148, 54

Conread position: 822-1010
Cow position: chr1:34856589-34856770 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 145, 59

Conread position: 822-1010
Cow position: chr1:40531064-40531250 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 22

Conread position: 822-1010
Cow position: chr1:44507012-44506834 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 822-1010
Cow position: chr1:54199340-54199517 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 33, 38

Conread position: 822-1010
Cow position: chr1:54258606-54258430 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 148, 59

Conread position: 822-1010
Cow position: chr1:57297521-57297340 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 145, 60

Conread position: 822-1010
Cow position: chr1:72068796-72068972 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 822-1010
Cow position: chr1:74084149-74084330 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 822-1010
Cow position: chr1:81228295-81228473 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 148, 59

Conread position: 822-1010
Cow position: chr1:86113361-86113544 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 158, 44

Conread position: 822-1010
Cow position: chr1:91066112-91066286 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 822-1010
Cow position: chr1:101267964-101268142 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 148, 30

Conread position: 822-1012
Cow position: chr1:77880691-77880871 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 145, 59

Conread position: 822-1012
Cow position: chr1:102349707-102349890 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 822-1036
Cow position: chr1:79165043-79165243 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 148, 59

Conread position: 822-1038
Cow position: chr1:42398152-42398356 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 148, 60

Conread position: 822-1039
Cow position: chr1:55428917-55429116 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 60

Conread position: 822-1039
Cow position: chr1:64804063-64804264 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 148, 59

Conread position: 822-1039
Cow position: chr1:73561608-73561810 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 148, 59

Conread position: 822-1039
Cow position: chr1:82337737-82337941 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 147, 59

Conread position: 822-1039
Cow position: chr1:90641076-90640868 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 148, 60

Conread position: 822-1040
Cow position: chr1:97696786-97696579 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 822-1044
Cow position: chr1:22448542-22448751 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 171
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 148, 60

Conread position: 822-1044
Cow position: chr1:53308350-53308556 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 148, 55

Conread position: 822-1044
Cow position: chr1:53370122-53369915 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 152, 17

Conread position: 824-1010
Cow position: chr1:47886443-47886622 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 825-1010
Cow position: chr1:98311106-98310932 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 142, 56

Conread position: 825-1012
Cow position: chr1:51445922-51445744 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 145, 27

Conread position: 825-1040
Cow position: chr1:71228129-71227919 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 95, 71

Conread position: 826-1039
Cow position: chr1:28563531-28563729 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 144, 56

Conread position: 826-1039
Cow position: chr1:74927919-74927720 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 144, 55

Conread position: 828-1005
Cow position: chr1:81471166-81471004 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 829-1017
Cow position: chr1:26702171-26702348 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 174, 52

Conread position: 830-1010
Cow position: chr1:51684838-51684667 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 78, 51

Show alignments to all cow chromosomes.