Cow genome map
Conread name: | Ss1.1-Pig4-TMW8063D21.3 |
Conread position: | 808-1034 |
Cow position: | chr1:43703463-43703250 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 168 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 18, 74 |
Conread position: | 810-1026 |
Cow position: | chr1:60281424-60281222 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 153 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 160, 71 |
Conread position: | 811-980 |
Cow position: | chr1:22394853-22394687 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 129 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 159, 65 |
Conread position: | 816-980 |
Cow position: | chr1:32001269-32001429 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 127 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 98, 11 |
Conread position: | 816-1010 |
Cow position: | chr1:53369257-53369072 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 146 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 38, 11 |
Conread position: | 816-1010 |
Cow position: | chr1:85596990-85596805 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 150 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 28, 66 |
Conread position: | 820-1009 |
Cow position: | chr1:100512651-100512463 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 148 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 9, 62 |
Conread position: | 821-981 |
Cow position: | chr1:56477632-56477478 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 120 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 149, 60 |
Conread position: | 821-1009 |
Cow position: | chr1:42545739-42545919 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 135 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 149, 60 |
Conread position: | 821-1017 |
Cow position: | chr1:6788243-6788426 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 142 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 149, 60 |
Conread position: | 822-967 |
Cow position: | chr1:71796271-71796408 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 113 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 822-980 |
Cow position: | chr1:5637020-5637184 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 123 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 822-980 |
Cow position: | chr1:36875069-36874906 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 123 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 822-981 |
Cow position: | chr1:92996852-92997005 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 120 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 148, 59 |
Conread position: | 822-988 |
Cow position: | chr1:34771464-34771620 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 126 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 148, 59 |
Conread position: | 822-1001 |
Cow position: | chr1:15333934-15333755 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 128 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 145, 80 |
Conread position: | 822-1002 |
Cow position: | chr1:53374472-53374305 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 134 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 148, 40 |
Conread position: | 822-1004 |
Cow position: | chr1:87095175-87095358 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 138 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 55, 68 |
Conread position: | 822-1004 |
Cow position: | chr1:98413811-98413639 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 133 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 822-1009 |
Cow position: | chr1:43872280-43872463 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 133 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 148, 161 |
Conread position: | 822-1010 |
Cow position: | chr1:4032671-4032492 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 145 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 148, 59 |
Conread position: | 822-1010 |
Cow position: | chr1:4291206-4291025 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 137 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 12, 60 |
Conread position: | 822-1010 |
Cow position: | chr1:4374298-4374472 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 143 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 87, 59 |
Conread position: | 822-1010 |
Cow position: | chr1:16060965-16061154 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 142 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 55, 70 |
Conread position: | 822-1010 |
Cow position: | chr1:31607849-31608030 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 134 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 148, 54 |
Conread position: | 822-1010 |
Cow position: | chr1:34856589-34856770 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 138 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 145, 59 |
Conread position: | 822-1010 |
Cow position: | chr1:40531064-40531250 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 139 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 70, 22 |
Conread position: | 822-1010 |
Cow position: | chr1:44507012-44506834 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 140 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 822-1010 |
Cow position: | chr1:54199340-54199517 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 145 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 33, 38 |
Conread position: | 822-1010 |
Cow position: | chr1:54258606-54258430 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 145 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 148, 59 |
Conread position: | 822-1010 |
Cow position: | chr1:57297521-57297340 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 134 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 145, 60 |
Conread position: | 822-1010 |
Cow position: | chr1:72068796-72068972 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 138 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 822-1010 |
Cow position: | chr1:74084149-74084330 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 145 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 822-1010 |
Cow position: | chr1:81228295-81228473 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 141 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 148, 59 |
Conread position: | 822-1010 |
Cow position: | chr1:86113361-86113544 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 140 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 158, 44 |
Conread position: | 822-1010 |
Cow position: | chr1:91066112-91066286 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 137 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 822-1010 |
Cow position: | chr1:101267964-101268142 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 137 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 148, 30 |
Conread position: | 822-1012 |
Cow position: | chr1:77880691-77880871 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 139 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 145, 59 |
Conread position: | 822-1012 |
Cow position: | chr1:102349707-102349890 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 139 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 822-1036 |
Cow position: | chr1:79165043-79165243 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 160 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 148, 59 |
Conread position: | 822-1038 |
Cow position: | chr1:42398152-42398356 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 155 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 148, 60 |
Conread position: | 822-1039 |
Cow position: | chr1:55428917-55429116 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 161 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 22, 60 |
Conread position: | 822-1039 |
Cow position: | chr1:64804063-64804264 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 156 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 148, 59 |
Conread position: | 822-1039 |
Cow position: | chr1:73561608-73561810 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 155 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 148, 59 |
Conread position: | 822-1039 |
Cow position: | chr1:82337737-82337941 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 153 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 147, 59 |
Conread position: | 822-1039 |
Cow position: | chr1:90641076-90640868 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 162 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 148, 60 |
Conread position: | 822-1040 |
Cow position: | chr1:97696786-97696579 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 157 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 822-1044 |
Cow position: | chr1:22448542-22448751 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 171 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 148, 60 |
Conread position: | 822-1044 |
Cow position: | chr1:53308350-53308556 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 160 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 148, 55 |
Conread position: | 822-1044 |
Cow position: | chr1:53370122-53369915 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 162 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 152, 17 |
Conread position: | 824-1010 |
Cow position: | chr1:47886443-47886622 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 134 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 825-1010 |
Cow position: | chr1:98311106-98310932 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 137 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 142, 56 |
Conread position: | 825-1012 |
Cow position: | chr1:51445922-51445744 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 139 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 145, 27 |
Conread position: | 825-1040 |
Cow position: | chr1:71228129-71227919 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 153 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 95, 71 |
Conread position: | 826-1039 |
Cow position: | chr1:28563531-28563729 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 154 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 144, 56 |
Conread position: | 826-1039 |
Cow position: | chr1:74927919-74927720 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 156 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 144, 55 |
Conread position: | 828-1005 |
Cow position: | chr1:81471166-81471004 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 133 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 829-1017 |
Cow position: | chr1:26702171-26702348 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 139 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 174, 52 |
Conread position: | 830-1010 |
Cow position: | chr1:51684838-51684667 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 140 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 78, 51 |
Show alignments to all cow chromosomes.