Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8063D21.3 |
| Conread position: | 811-968 |
| Cow position: | chr13:42229246-42229406 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 16, 135 |
| Conread position: | 817-1012 |
| Cow position: | chr13:8652495-8652311 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 153, 63 |
| Conread position: | 818-1010 |
| Cow position: | chr13:22115642-22115837 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 74, 9 |
| Conread position: | 820-1004 |
| Cow position: | chr13:30026059-30026235 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 144, 61 |
| Conread position: | 822-979 |
| Cow position: | chr13:10924969-10924814 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 148, 73 |
| Conread position: | 822-986 |
| Cow position: | chr13:3989149-3989309 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 148, 78 |
| Conread position: | 822-998 |
| Cow position: | chr13:15445993-15446160 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 98, 46 |
| Conread position: | 822-1004 |
| Cow position: | chr13:4420294-4420466 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 148, 67 |
| Conread position: | 822-1006 |
| Cow position: | chr13:45352983-45353167 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 83, 161 |
| Conread position: | 822-1009 |
| Cow position: | chr13:20650034-20649855 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 822-1009 |
| Cow position: | chr13:44003653-44003846 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 64, 30 |
| Conread position: | 822-1010 |
| Cow position: | chr13:8524666-8524496 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 822-1010 |
| Cow position: | chr13:26369475-26369651 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 147, 59 |
| Conread position: | 822-1010 |
| Cow position: | chr13:37592994-37592813 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 100, 58 |
| Conread position: | 822-1010 |
| Cow position: | chr13:60974027-60974208 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 58, 70 |
| Conread position: | 822-1012 |
| Cow position: | chr13:2463283-2463100 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 147, 60 |
| Conread position: | 822-1012 |
| Cow position: | chr13:18166684-18166860 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 822-1034 |
| Cow position: | chr13:12876023-12875822 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 825-980 |
| Cow position: | chr13:15621765-15621914 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 145, 14 |
| Conread position: | 825-1010 |
| Cow position: | chr13:5758387-5758216 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 145, 56 |
| Conread position: | 826-1029 |
| Cow position: | chr13:14771408-14771600 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 144, 55 |
| Conread position: | 826-1039 |
| Cow position: | chr13:1043013-1042809 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 81, 55 |
| Conread position: | 827-1039 |
| Cow position: | chr13:7789964-7790166 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 83, 54 |
| Conread position: | 831-1009 |
| Cow position: | chr13:16711588-16711754 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 139, 47 |
| Conread position: | 831-1010 |
| Cow position: | chr13:24155490-24155674 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 831-1010 |
| Cow position: | chr13:25531831-25531663 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 133, 52 |
| Conread position: | 837-1009 |
| Cow position: | chr13:36714782-36714944 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 133, 6 |
| Conread position: | 838-1012 |
| Cow position: | chr13:20042002-20041835 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 132, 44 |
| Conread position: | 846-989 |
| Cow position: | chr13:13533703-13533558 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 62, 35 |
| Conread position: | 904-1009 |
| Cow position: | chr13:61170698-61170595 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 66, 86 |
Show alignments to all cow chromosomes.