Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8063D21.3 |
| Conread position: | 816-1009 |
| Cow position: | chr18:3044455-3044263 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 174, 67 |
| Conread position: | 819-1009 |
| Cow position: | chr18:36098215-36098030 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 139, 58 |
| Conread position: | 819-1010 |
| Cow position: | chr18:10861427-10861610 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 151, 7 |
| Conread position: | 821-1010 |
| Cow position: | chr18:51676088-51676268 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 146, 55 |
| Conread position: | 822-980 |
| Cow position: | chr18:5632268-5632118 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 148, 57 |
| Conread position: | 822-996 |
| Cow position: | chr18:51643365-51643528 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 822-1004 |
| Cow position: | chr18:4182187-4182354 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 822-1006 |
| Cow position: | chr18:3209726-3209546 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 81, 61 |
| Conread position: | 822-1006 |
| Cow position: | chr18:52635070-52635253 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 145, 73 |
| Conread position: | 822-1009 |
| Cow position: | chr18:56159462-56159289 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 34, 44 |
| Conread position: | 822-1010 |
| Cow position: | chr18:219340-219160 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 142, 55 |
| Conread position: | 822-1010 |
| Cow position: | chr18:3211878-3211699 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 822-1010 |
| Cow position: | chr18:17005260-17005082 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 148, 60 |
| Conread position: | 822-1010 |
| Cow position: | chr18:26998885-26998696 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 45 |
| Conread position: | 822-1010 |
| Cow position: | chr18:35636346-35636523 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 148, 58 |
| Conread position: | 822-1010 |
| Cow position: | chr18:48828774-48828954 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 822-1010 |
| Cow position: | chr18:50974294-50974468 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 822-1010 |
| Cow position: | chr18:51405906-51406083 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 103, 46 |
| Conread position: | 822-1039 |
| Cow position: | chr18:1144183-1144390 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 826-1011 |
| Cow position: | chr18:51656046-51656222 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 141, 55 |
| Conread position: | 827-1003 |
| Cow position: | chr18:56190966-56191136 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 69, 74 |
| Conread position: | 829-1011 |
| Cow position: | chr18:37023558-37023726 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 141, 6 |
| Conread position: | 832-1002 |
| Cow position: | chr18:24022378-24022208 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 76, 52 |
| Conread position: | 832-1012 |
| Cow position: | chr18:52472494-52472323 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 833-1006 |
| Cow position: | chr18:3150334-3150508 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 44, 85 |
| Conread position: | 834-1010 |
| Cow position: | chr18:36297025-36297205 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 135, 58 |
| Conread position: | 836-1006 |
| Cow position: | chr18:3709022-3708853 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 20, 30 |
| Conread position: | 838-1006 |
| Cow position: | chr18:45185740-45185577 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 102, 45 |
| Conread position: | 902-1039 |
| Cow position: | chr18:29188946-29188810 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 11, 100 |
| Conread position: | 904-1010 |
| Cow position: | chr18:5189758-5189865 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 66, 0 |
Show alignments to all cow chromosomes.