Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8063D21.3 |
| Conread position: | 1-515 |
| Cow position: | chr19:8963407-8962899 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 116 |
| Conread position: | 540-763 |
| Cow position: | chr19:8962460-8962232 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 96 |
| Conread position: | 816-1012 |
| Cow position: | chr19:22153814-22154010 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 12, 64 |
| Conread position: | 821-1009 |
| Cow position: | chr19:4503246-4503067 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 120, 61 |
| Conread position: | 821-1010 |
| Cow position: | chr19:7404353-7404531 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 822-973 |
| Cow position: | chr19:729720-729862 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 109, 59 |
| Conread position: | 822-980 |
| Cow position: | chr19:12094033-12093877 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 822-980 |
| Cow position: | chr19:39622766-39622928 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 822-995 |
| Cow position: | chr19:2221053-2221219 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 822-1004 |
| Cow position: | chr19:51285662-51285486 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 148, 61 |
| Conread position: | 822-1010 |
| Cow position: | chr19:6079336-6079512 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 89, 57 |
| Conread position: | 822-1010 |
| Cow position: | chr19:7543436-7543255 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 132, 59 |
| Conread position: | 822-1010 |
| Cow position: | chr19:19919439-19919612 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 822-1010 |
| Cow position: | chr19:21816989-21816811 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 147, 55 |
| Conread position: | 822-1010 |
| Cow position: | chr19:46094614-46094790 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 34, 44 |
| Conread position: | 822-1012 |
| Cow position: | chr19:31824988-31825166 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 142, 59 |
| Conread position: | 822-1012 |
| Cow position: | chr19:47859293-47859468 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 822-1029 |
| Cow position: | chr19:34166393-34166195 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 822-1039 |
| Cow position: | chr19:24137285-24137084 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 822-1039 |
| Cow position: | chr19:32451107-32450904 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 94, 59 |
| Conread position: | 822-1039 |
| Cow position: | chr19:36845272-36845070 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 824-1010 |
| Cow position: | chr19:55957551-55957727 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 81, 15 |
| Conread position: | 825-986 |
| Cow position: | chr19:51751146-51751301 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 90, 58 |
| Conread position: | 825-1006 |
| Cow position: | chr19:14928637-14928803 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 145, 45 |
| Conread position: | 825-1009 |
| Cow position: | chr19:11443008-11442831 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 826-1009 |
| Cow position: | chr19:13267170-13267343 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 110, 54 |
| Conread position: | 826-1012 |
| Cow position: | chr19:42564163-42563983 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 144, 74 |
| Conread position: | 827-1003 |
| Cow position: | chr19:31595318-31595155 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 143, 54 |
| Conread position: | 827-1039 |
| Cow position: | chr19:21335588-21335790 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 143, 56 |
| Conread position: | 830-1006 |
| Cow position: | chr19:50237448-50237615 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 140, 47 |
| Conread position: | 834-1009 |
| Cow position: | chr19:51334691-51334521 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 136, 48 |
| Conread position: | 843-1029 |
| Cow position: | chr19:41517895-41518080 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 46, 141 |
Show alignments to all cow chromosomes.