Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8063D21.3 |
| Conread position: | 813-1039 |
| Cow position: | chr2:57393250-57393460 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 157, 6 |
| Conread position: | 816-1003 |
| Cow position: | chr2:36017367-36017547 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 68 |
| Conread position: | 816-1010 |
| Cow position: | chr2:45367340-45367155 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 816-1039 |
| Cow position: | chr2:30817014-30816793 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 17, 64 |
| Conread position: | 819-1006 |
| Cow position: | chr2:41954923-41954748 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 151, 62 |
| Conread position: | 822-968 |
| Cow position: | chr2:39228850-39228707 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 55, 71 |
| Conread position: | 822-976 |
| Cow position: | chr2:14626625-14626472 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 58, 13 |
| Conread position: | 822-978 |
| Cow position: | chr2:29734860-29734711 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 23, 60 |
| Conread position: | 822-981 |
| Cow position: | chr2:12051189-12051037 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 148, 66 |
| Conread position: | 822-991 |
| Cow position: | chr2:40597612-40597455 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 822-999 |
| Cow position: | chr2:70945438-70945274 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 822-1000 |
| Cow position: | chr2:49467663-49467494 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 148, 60 |
| Conread position: | 822-1004 |
| Cow position: | chr2:39662739-39662568 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 148, 57 |
| Conread position: | 822-1004 |
| Cow position: | chr2:69367093-69367263 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 822-1006 |
| Cow position: | chr2:42970148-42969970 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 153, 57 |
| Conread position: | 822-1009 |
| Cow position: | chr2:15250216-15250043 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 822-1009 |
| Cow position: | chr2:59397019-59397194 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 148, 69 |
| Conread position: | 822-1010 |
| Cow position: | chr2:15298573-15298397 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 822-1010 |
| Cow position: | chr2:19294628-19294455 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 148, 61 |
| Conread position: | 822-1010 |
| Cow position: | chr2:44025414-44025233 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 822-1010 |
| Cow position: | chr2:44081471-44081297 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 148, 61 |
| Conread position: | 822-1010 |
| Cow position: | chr2:45470041-45469868 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 148, 55 |
| Conread position: | 822-1010 |
| Cow position: | chr2:70674760-70674587 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 145, 17 |
| Conread position: | 822-1011 |
| Cow position: | chr2:66480152-66480328 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 822-1012 |
| Cow position: | chr2:32660211-32660033 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 107, 55 |
| Conread position: | 822-1016 |
| Cow position: | chr2:50565968-50565781 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 822-1029 |
| Cow position: | chr2:72527994-72527799 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 148, 60 |
| Conread position: | 822-1029 |
| Cow position: | chr2:76340617-76340816 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 46, 54 |
| Conread position: | 822-1036 |
| Cow position: | chr2:19594756-19594553 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 825-980 |
| Cow position: | chr2:46406357-46406205 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 8, 57 |
| Conread position: | 825-1010 |
| Cow position: | chr2:21704-21877 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 145, 42 |
| Conread position: | 825-1010 |
| Cow position: | chr2:6039044-6038864 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 145, 56 |
| Conread position: | 825-1010 |
| Cow position: | chr2:11412630-11412452 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 145, 56 |
| Conread position: | 825-1010 |
| Cow position: | chr2:24859044-24858863 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 9, 56 |
| Conread position: | 825-1010 |
| Cow position: | chr2:28118532-28118359 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 825-1012 |
| Cow position: | chr2:80839097-80839272 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 145, 58 |
| Conread position: | 825-1029 |
| Cow position: | chr2:42183403-42183209 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 145, 55 |
| Conread position: | 825-1032 |
| Cow position: | chr2:69238310-69238106 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 136, 56 |
| Conread position: | 826-1009 |
| Cow position: | chr2:81894311-81894490 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 90, 56 |
| Conread position: | 826-1010 |
| Cow position: | chr2:38273580-38273402 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 144, 65 |
| Conread position: | 828-1006 |
| Cow position: | chr2:29269096-29268924 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 141, 75 |
| Conread position: | 828-1010 |
| Cow position: | chr2:7524104-7524276 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 142, 50 |
| Conread position: | 833-1010 |
| Cow position: | chr2:56102431-56102605 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 48, 62 |
| Conread position: | 834-1017 |
| Cow position: | chr2:69250643-69250823 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 136, 58 |
| Conread position: | 841-1010 |
| Cow position: | chr2:21407938-21407781 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 129, 41 |
| Conread position: | 843-1010 |
| Cow position: | chr2:39058877-39058714 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 51 |
Show alignments to all cow chromosomes.