Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8063D21.3
        

               Conread position:
               816-1038
               

               Cow position:
               chr29:12025429-12025640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               12, 67
               

               Conread position:
               821-993
               

               Cow position:
               chr29:38581012-38580848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               149, 56
               

               Conread position:
               821-1010
               

               Cow position:
               chr29:17301566-17301388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               822-992
               

               Cow position:
               chr29:34745627-34745789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               148, 29
               

               Conread position:
               822-1010
               

               Cow position:
               chr29:18462511-18462696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               74, 108
               

               Conread position:
               822-1010
               

               Cow position:
               chr29:18878450-18878642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               36, 86
               

               Conread position:
               822-1010
               

               Cow position:
               chr29:40096999-40096819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               28, 62
               

               Conread position:
               822-1029
               

               Cow position:
               chr29:35292123-35291931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               148, 59
               

               Conread position:
               823-1010
               

               Cow position:
               chr29:4520370-4520194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               147, 59
               

               Conread position:
               826-1005
               

               Cow position:
               chr29:22068713-22068887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               144, 50
               

               Conread position:
               826-1006
               

               Cow position:
               chr29:4120881-4120706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               148, 55
               

               Conread position:
               826-1010
               

               Cow position:
               chr29:9139449-9139268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               144, 55
               
Show alignments to all cow chromosomes.