Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8063D21.3 |
| Conread position: | 816-1006 |
| Cow position: | chr3:48241636-48241457 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 11, 52 |
| Conread position: | 816-1010 |
| Cow position: | chr3:15192601-15192401 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 61, 122 |
| Conread position: | 816-1010 |
| Cow position: | chr3:65800607-65800432 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 817-1009 |
| Cow position: | chr3:18067153-18066973 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 153, 24 |
| Conread position: | 819-1000 |
| Cow position: | chr3:3032423-3032251 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 7, 64 |
| Conread position: | 819-1010 |
| Cow position: | chr3:66609829-66610006 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 5, 62 |
| Conread position: | 819-1041 |
| Cow position: | chr3:80081801-80082018 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 207, 85 |
| Conread position: | 820-1011 |
| Cow position: | chr3:15859654-15859831 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 9, 62 |
| Conread position: | 820-1039 |
| Cow position: | chr3:79207974-79208189 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 62 |
| Conread position: | 821-1014 |
| Cow position: | chr3:11711975-11711790 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 149, 60 |
| Conread position: | 821-1017 |
| Cow position: | chr3:54434986-54434805 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 822-999 |
| Cow position: | chr3:67520157-67520332 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 62 |
| Conread position: | 822-1004 |
| Cow position: | chr3:25945102-25944924 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 148, 87 |
| Conread position: | 822-1006 |
| Cow position: | chr3:5097216-5097044 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 822-1007 |
| Cow position: | chr3:2850885-2851055 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 147, 59 |
| Conread position: | 822-1009 |
| Cow position: | chr3:55970516-55970343 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 822-1010 |
| Cow position: | chr3:2025207-2025021 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 16, 62 |
| Conread position: | 822-1010 |
| Cow position: | chr3:23444879-23445057 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 822-1010 |
| Cow position: | chr3:39328409-39328231 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 148, 55 |
| Conread position: | 822-1010 |
| Cow position: | chr3:53046650-53046822 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 822-1010 |
| Cow position: | chr3:55819767-55819584 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 148, 74 |
| Conread position: | 822-1010 |
| Cow position: | chr3:59884060-59884236 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 148, 60 |
| Conread position: | 822-1010 |
| Cow position: | chr3:60597553-60597379 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 147, 61 |
| Conread position: | 822-1010 |
| Cow position: | chr3:68587032-68586858 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 148, 58 |
| Conread position: | 822-1012 |
| Cow position: | chr3:30180095-30179915 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 41, 60 |
| Conread position: | 822-1017 |
| Cow position: | chr3:15051939-15052122 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 822-1017 |
| Cow position: | chr3:65969176-65968988 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 822-1018 |
| Cow position: | chr3:13380266-13380463 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 822-1029 |
| Cow position: | chr3:71430195-71430389 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 822-1036 |
| Cow position: | chr3:55085160-55085371 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 32, 61 |
| Conread position: | 822-1039 |
| Cow position: | chr3:46350682-46350473 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 148, 12 |
| Conread position: | 822-1039 |
| Cow position: | chr3:53592680-53592887 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 148, 53 |
| Conread position: | 822-1039 |
| Cow position: | chr3:55712449-55712239 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 148, 62 |
| Conread position: | 822-1044 |
| Cow position: | chr3:53270839-53270632 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 823-1010 |
| Cow position: | chr3:77365282-77365462 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 825-980 |
| Cow position: | chr3:74939578-74939419 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 81 |
| Conread position: | 825-1001 |
| Cow position: | chr3:19793584-19793747 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 116, 56 |
| Conread position: | 825-1010 |
| Cow position: | chr3:12711909-12712082 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 145, 56 |
| Conread position: | 825-1012 |
| Cow position: | chr3:19792911-19792727 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 65, 55 |
| Conread position: | 826-978 |
| Cow position: | chr3:22221333-22221184 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 144, 55 |
| Conread position: | 826-978 |
| Cow position: | chr3:43727084-43726941 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 144, 56 |
| Conread position: | 826-1004 |
| Cow position: | chr3:72019124-72018958 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 144, 54 |
| Conread position: | 827-1010 |
| Cow position: | chr3:33698735-33698562 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 143, 52 |
| Conread position: | 828-980 |
| Cow position: | chr3:74500246-74500100 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 142, 52 |
| Conread position: | 829-1017 |
| Cow position: | chr3:48578840-48578666 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 141, 7 |
| Conread position: | 838-1010 |
| Cow position: | chr3:63860896-63861060 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 132, 43 |
| Conread position: | 839-1004 |
| Cow position: | chr3:61678697-61678532 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 131, 65 |
| Conread position: | 849-1010 |
| Cow position: | chr3:4087177-4087331 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 121, 35 |
Show alignments to all cow chromosomes.