Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8063D21.3 |
| Conread position: | 816-1039 |
| Cow position: | chr9:26086043-26086259 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 11, 83 |
| Conread position: | 817-1009 |
| Cow position: | chr9:51566504-51566314 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 817-1010 |
| Cow position: | chr9:50139276-50139454 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 821-980 |
| Cow position: | chr9:50543431-50543279 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 149, 60 |
| Conread position: | 822-980 |
| Cow position: | chr9:6839989-6840145 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 148, 60 |
| Conread position: | 822-988 |
| Cow position: | chr9:44822328-44822161 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 107 |
| Conread position: | 822-1003 |
| Cow position: | chr9:30402429-30402258 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 148, 58 |
| Conread position: | 822-1005 |
| Cow position: | chr9:42445987-42445815 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 822-1006 |
| Cow position: | chr9:1952274-1952104 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 148, 61 |
| Conread position: | 822-1006 |
| Cow position: | chr9:55084306-55084132 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 822-1010 |
| Cow position: | chr9:5433628-5433807 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 822-1010 |
| Cow position: | chr9:8534694-8534516 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 822-1010 |
| Cow position: | chr9:38343883-38344059 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 822-1011 |
| Cow position: | chr9:11123489-11123308 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 822-1011 |
| Cow position: | chr9:29185141-29184963 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 148, 70 |
| Conread position: | 822-1012 |
| Cow position: | chr9:35105794-35105610 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 34, 44 |
| Conread position: | 822-1039 |
| Cow position: | chr9:5531938-5532145 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 22, 60 |
| Conread position: | 825-1010 |
| Cow position: | chr9:8919989-8920167 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 825-1010 |
| Cow position: | chr9:8998348-8998525 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 145, 58 |
| Conread position: | 825-1010 |
| Cow position: | chr9:15215688-15215513 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 84, 56 |
| Conread position: | 825-1029 |
| Cow position: | chr9:47906282-47906093 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 145, 56 |
| Conread position: | 826-1010 |
| Cow position: | chr9:47446028-47445858 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 144, 55 |
| Conread position: | 826-1011 |
| Cow position: | chr9:64050561-64050386 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 143, 46 |
| Conread position: | 827-1009 |
| Cow position: | chr9:62724534-62724710 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 143, 55 |
| Conread position: | 830-1029 |
| Cow position: | chr9:10092390-10092199 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 140, 51 |
| Conread position: | 831-1010 |
| Cow position: | chr9:29091797-29091969 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 139, 52 |
| Conread position: | 831-1011 |
| Cow position: | chr9:7409771-7409952 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 149 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 835-1010 |
| Cow position: | chr9:33681683-33681853 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 76, 47 |
| Conread position: | 839-1010 |
| Cow position: | chr9:20738709-20738875 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 131, 41 |
| Conread position: | 904-1042 |
| Cow position: | chr9:51720836-51720701 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 66, 78 |
Show alignments to all cow chromosomes.