Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8065J01.3 |
| Conread position: | 11-629 |
| Cow position: | chr1:31364615-31365233 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 398 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 10, 90 |
| Conread position: | 12-714 |
| Cow position: | chr1:13574060-13573371 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 450 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 9, 48 |
| Conread position: | 18-714 |
| Cow position: | chr1:95406932-95406263 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 17 |
| Conread position: | 20-669 |
| Cow position: | chr1:62243180-62243813 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 409 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 236, 80 |
| Conread position: | 32-510 |
| Cow position: | chr1:68336518-68336987 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 318 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 88, 43 |
| Conread position: | 116-592 |
| Cow position: | chr1:57972312-57972801 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 310 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 25, 45 |
| Conread position: | 125-587 |
| Cow position: | chr1:52743157-52743622 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 312 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 93, 13 |
| Conread position: | 192-697 |
| Cow position: | chr1:35034836-35034337 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 326 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 130, 12 |
| Conread position: | 200-510 |
| Cow position: | chr1:55128111-55127791 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 128, 33 |
| Conread position: | 204-592 |
| Cow position: | chr1:72919824-72920193 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 258 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 81, 21 |
| Conread position: | 205-517 |
| Cow position: | chr1:1537649-1537966 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 42, 82 |
| Conread position: | 205-684 |
| Cow position: | chr1:42078935-42078457 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 315 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 151, 28 |
| Conread position: | 208-592 |
| Cow position: | chr1:28357722-28358117 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 259 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 123, 31 |
| Conread position: | 213-636 |
| Cow position: | chr1:70789635-70789227 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 284 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 72, 23 |
| Conread position: | 231-609 |
| Cow position: | chr1:55155718-55156114 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 54, 62 |
| Conread position: | 231-670 |
| Cow position: | chr1:39701929-39701466 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 296 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 21, 53 |
| Conread position: | 237-656 |
| Cow position: | chr1:5477554-5477121 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 91, 10 |
| Conread position: | 240-669 |
| Cow position: | chr1:9560796-9560355 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 288 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 75, 7 |
| Conread position: | 242-686 |
| Cow position: | chr1:10013664-10014113 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 286 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 80, 5 |
| Conread position: | 255-731 |
| Cow position: | chr1:88212555-88213027 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 301 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 37 |
| Conread position: | 263-669 |
| Cow position: | chr1:22843897-22843468 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 277 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 27, 19 |
| Conread position: | 396-669 |
| Cow position: | chr1:30539234-30539513 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 72, 35 |
| Conread position: | 401-669 |
| Cow position: | chr1:21691135-21691408 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 114, 30 |
| Conread position: | 432-698 |
| Cow position: | chr1:100188479-100188209 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 87, 144 |
Show alignments to all cow chromosomes.