Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8065J01.3
        

               Conread position:
               6-714
               

               Cow position:
               chr17:6069872-6069168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               728
               

               Alignm identity:
               445
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               15, 95
               

               Conread position:
               9-669
               

               Cow position:
               chr17:6261180-6260518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               685
               

               Alignm identity:
               421
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               12, 67
               

               Conread position:
               10-669
               

               Cow position:
               chr17:24028682-24029343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               682
               

               Alignm identity:
               414
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               11, 23
               

               Conread position:
               189-672
               

               Cow position:
               chr17:31950886-31951354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               314
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               96, 50
               

               Conread position:
               201-713
               

               Cow position:
               chr17:3326397-3325907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               520
               

               Alignm identity:
               325
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               15, 25
               

               Conread position:
               233-592
               

               Cow position:
               chr17:7941955-7942317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               250
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               52, 60
               

               Conread position:
               234-669
               

               Cow position:
               chr17:19267713-19268168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               297
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               242-669
               

               Cow position:
               chr17:14910374-14910806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               271
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               88, 8
               

               Conread position:
               320-714
               

               Cow position:
               chr17:28001187-28000804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               191, 50
               

               Conread position:
               446-709
               

               Cow position:
               chr17:11025626-11025893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 144
               
Show alignments to all cow chromosomes.