Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8065J01.3
        

               Conread position:
               7-665
               

               Cow position:
               chr19:29141472-29140844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               670
               

               Alignm identity:
               427
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               15, 67
               

               Conread position:
               19-709
               

               Cow position:
               chr19:11952821-11952143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               713
               

               Alignm identity:
               455
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               262, 34
               

               Conread position:
               72-674
               

               Cow position:
               chr19:30256555-30255956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               622
               

               Alignm identity:
               392
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               28, 75
               

               Conread position:
               93-732
               

               Cow position:
               chr19:2639799-2640444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               657
               

               Alignm identity:
               541
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 86
               

               Conread position:
               201-517
               

               Cow position:
               chr19:23359999-23359682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               113, 24
               

               Conread position:
               201-668
               

               Cow position:
               chr19:19011346-19010891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               316
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               37, 76
               

               Conread position:
               227-508
               

               Cow position:
               chr19:23965595-23965313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               105, 10
               

               Conread position:
               233-675
               

               Cow position:
               chr19:5162389-5162833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               299
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               100, 60
               

               Conread position:
               235-666
               

               Cow position:
               chr19:5652406-5652838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               284
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 64
               

               Conread position:
               262-669
               

               Cow position:
               chr19:12774409-12773992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               276
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               23, 31
               

               Conread position:
               263-687
               

               Cow position:
               chr19:30747525-30747096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               63, 17
               

               Conread position:
               326-592
               

               Cow position:
               chr19:24834785-24835068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               26, 198
               
Show alignments to all cow chromosomes.