Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8065J01.3
        

               Conread position:
               4-615
               

               Cow position:
               chr22:4242195-4242788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               631
               

               Alignm identity:
               400
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               15, 41
               

               Conread position:
               9-686
               

               Cow position:
               chr22:10303904-10304548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               689
               

               Alignm identity:
               427
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               14, 50
               

               Conread position:
               21-498
               

               Cow position:
               chr22:203135-202671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               302
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               350, 37
               

               Conread position:
               32-727
               

               Cow position:
               chr22:13673396-13674092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               725
               

               Alignm identity:
               447
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               58, 47
               

               Conread position:
               189-669
               

               Cow position:
               chr22:10560271-10559795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               318
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               23, 15
               

               Conread position:
               233-584
               

               Cow position:
               chr22:36860309-36860671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               24, 62
               

               Conread position:
               239-732
               

               Cow position:
               chr22:34958707-34958196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               514
               

               Alignm identity:
               317
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               91, 203
               

               Conread position:
               256-730
               

               Cow position:
               chr22:38176295-38175814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               311
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               29, 37
               

               Conread position:
               264-732
               

               Cow position:
               chr22:23942947-23943430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               315
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               51, 13
               

               Conread position:
               271-669
               

               Cow position:
               chr22:37292474-37292894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               273
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               14, 22
               

               Conread position:
               288-632
               

               Cow position:
               chr22:13764721-13764371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               34, 74
               

               Conread position:
               321-517
               

               Cow position:
               chr22:16013873-16013676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               53, 114
               
Show alignments to all cow chromosomes.