Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8065J01.3
        

               Conread position:
               1-495
               

               Cow position:
               chr23:13322725-13322245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               312
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               9, 64
               

               Conread position:
               9-718
               

               Cow position:
               chr23:14263302-14262582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               744
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 136
               

               Conread position:
               10-672
               

               Cow position:
               chr23:3879657-3880309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               683
               

               Alignm identity:
               419
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               10, 91
               

               Conread position:
               54-514
               

               Cow position:
               chr23:18266227-18266689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               303
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               99, 33
               

               Conread position:
               82-590
               

               Cow position:
               chr23:3181337-3180842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               522
               

               Alignm identity:
               338
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               18, 51
               

               Conread position:
               202-513
               

               Cow position:
               chr23:32892120-32892433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               124, 34
               

               Conread position:
               202-607
               

               Cow position:
               chr23:8299125-8299531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               261
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               145, 23
               

               Conread position:
               233-592
               

               Cow position:
               chr23:15178302-15177926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               23, 61
               

               Conread position:
               233-669
               

               Cow position:
               chr23:2025854-2026303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               294
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               23, 45
               

               Conread position:
               250-592
               

               Cow position:
               chr23:16236252-16236603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               35, 43
               
Show alignments to all cow chromosomes.