Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8065J01.3
        

               Conread position:
               7-368
               

               Cow position:
               chr24:17734000-17733639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               14, 87
               

               Conread position:
               9-513
               

               Cow position:
               chr24:29408181-29408679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               523
               

               Alignm identity:
               333
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               12, 79
               

               Conread position:
               9-584
               

               Cow position:
               chr24:19834924-19834339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               602
               

               Alignm identity:
               384
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               11, 67
               

               Conread position:
               9-605
               

               Cow position:
               chr24:9545574-9544991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               612
               

               Alignm identity:
               387
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               12, 34
               

               Conread position:
               25-402
               

               Cow position:
               chr24:17425237-17425595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               254
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               265, 40
               

               Conread position:
               76-669
               

               Cow position:
               chr24:25467166-25467755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               610
               

               Alignm identity:
               380
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               93, 31
               

               Conread position:
               203-683
               

               Cow position:
               chr24:910395-910877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               325
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               138, 24
               

               Conread position:
               204-652
               

               Cow position:
               chr24:22482740-22482288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               296
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               74, 21
               

               Conread position:
               233-513
               

               Cow position:
               chr24:27127767-27128055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               57, 14
               

               Conread position:
               323-686
               

               Cow position:
               chr24:25538111-25538466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               247
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               50, 14
               

               Conread position:
               374-714
               

               Cow position:
               chr24:39448486-39448827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               36, 22
               
Show alignments to all cow chromosomes.