Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8065J01.3 |
| Conread position: | 7-517 |
| Cow position: | chrX:19725745-19726249 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 332 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 16, 131 |
| Conread position: | 9-671 |
| Cow position: | chrX:1548218-1547558 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 428 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 12, 34 |
| Conread position: | 20-587 |
| Cow position: | chrX:24523985-24523419 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 139 |
| Conread position: | 72-592 |
| Cow position: | chrX:5854281-5854797 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 348 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 27, 63 |
| Conread position: | 74-670 |
| Cow position: | chrX:21731574-21732180 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 386 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 91 |
| Conread position: | 99-694 |
| Cow position: | chrX:23958203-23957626 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 382 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 200-609 |
| Cow position: | chrX:44752150-44752570 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 271 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 129, 25 |
| Conread position: | 201-632 |
| Cow position: | chrX:21971879-21971454 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 292 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 116, 24 |
| Conread position: | 201-669 |
| Cow position: | chrX:17612963-17613435 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 316 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 84, 35 |
| Conread position: | 201-671 |
| Cow position: | chrX:11772115-11772578 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 311 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 141, 14 |
| Conread position: | 203-474 |
| Cow position: | chrX:12067054-12066780 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 82, 22 |
| Conread position: | 205-574 |
| Cow position: | chrX:11086232-11086612 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 259 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 80, 10 |
| Conread position: | 209-501 |
| Cow position: | chrX:18904432-18904733 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 124, 20 |
| Conread position: | 215-500 |
| Cow position: | chrX:33802174-33801896 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 70, 10 |
| Conread position: | 228-669 |
| Cow position: | chrX:29852528-29852984 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 296 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 28, 67 |
| Conread position: | 229-500 |
| Cow position: | chrX:19605293-19605564 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 8, 26 |
| Conread position: | 233-583 |
| Cow position: | chrX:26529010-26528643 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 23, 62 |
| Conread position: | 233-669 |
| Cow position: | chrX:29286469-29286011 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 292 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 62 |
| Conread position: | 233-712 |
| Cow position: | chrX:18553462-18552966 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 322 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 52, 14 |
| Conread position: | 266-677 |
| Cow position: | chrX:21275916-21276323 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 264 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 32, 15 |
| Conread position: | 297-695 |
| Cow position: | chrX:17727550-17727151 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 258 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 218, 21 |
| Conread position: | 302-593 |
| Cow position: | chrX:12017394-12017692 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 109 |
| Conread position: | 321-661 |
| Cow position: | chrX:18768111-18767763 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 50, 67 |
| Conread position: | 372-732 |
| Cow position: | chrX:20506420-20506055 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 24 |
| Conread position: | 387-517 |
| Cow position: | chrX:10441917-10442044 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
Show alignments to all cow chromosomes.