Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8067M11.3
        

               Conread position:
               604-1447
               

               Cow position:
               chr7:4123958-4124777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               851
               

               Alignm identity:
               659
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 346
               

               Conread position:
               606-849
               

               Cow position:
               chr7:11577544-11577301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               188, 225
               

               Conread position:
               606-1082
               

               Cow position:
               chr7:14426853-14426409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 0
               

               Conread position:
               749-1447
               

               Cow position:
               chr7:14426736-14426030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               724
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 19
               

               Conread position:
               793-1447
               

               Cow position:
               chr7:11577399-11576757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               656
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 131
               

               Conread position:
               1558-1783
               

               Cow position:
               chr7:11576696-11576465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               182
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               30, 84
               

               Conread position:
               1590-1904
               

               Cow position:
               chr7:4124868-4125157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               146, 19
               

               Conread position:
               1989-2155
               

               Cow position:
               chr7:14425536-14425376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               163, 18
               

               Conread position:
               2013-2154
               

               Cow position:
               chr7:11576195-11576058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               2030-2197
               

               Cow position:
               chr7:4125259-4125419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               6, 14
               
Show alignments to all cow chromosomes.