Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8068E11.3 |
| Conread position: | 520-1000 |
| Cow position: | chr5:27898952-27899430 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 308 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 103, 6 |
| Conread position: | 572-1008 |
| Cow position: | chr5:24345077-24345498 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 280 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 45, 97 |
| Conread position: | 573-1008 |
| Cow position: | chr5:45601644-45602079 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 637-1006 |
| Cow position: | chr5:41629779-41629406 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 24, 93 |
| Conread position: | 647-1008 |
| Cow position: | chr5:62278787-62278432 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 190, 22 |
| Conread position: | 648-1003 |
| Cow position: | chr5:31008600-31008255 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 19 |
| Conread position: | 648-1003 |
| Cow position: | chr5:41517252-41517600 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 250 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 36, 26 |
| Conread position: | 652-1000 |
| Cow position: | chr5:18551103-18550773 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 57, 41 |
| Conread position: | 652-1008 |
| Cow position: | chr5:5880713-5881072 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 218, 52 |
| Conread position: | 653-1008 |
| Cow position: | chr5:66983517-66983159 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 123, 16 |
| Conread position: | 701-1000 |
| Cow position: | chr5:42135903-42135600 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 15, 54 |
| Conread position: | 713-1008 |
| Cow position: | chr5:58526026-58526318 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 53, 19 |
| Conread position: | 738-1008 |
| Cow position: | chr5:7066296-7066019 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 222 |
| Conread position: | 824-1006 |
| Cow position: | chr5:14668790-14668602 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 47, 142 |
Show alignments to all cow chromosomes.