Cow genome map


           Conread name:
           Ss1.1-Spl1-SPL010001G10.5
        

               Conread position:
               1202-1639
               

               Cow position:
               chr14:41198293-41198757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               315
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               40, 23
               

               Conread position:
               1233-1649
               

               Cow position:
               chr14:37133129-37132717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               279
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               23, 52
               

               Conread position:
               1285-1648
               

               Cow position:
               chr14:9230844-9231210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               251
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               91, 95
               

               Conread position:
               1286-1579
               

               Cow position:
               chr14:28602553-28602259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               177, 53
               

               Conread position:
               1303-1650
               

               Cow position:
               chr14:14471664-14471317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               240
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               189, 84
               

               Conread position:
               1478-1640
               

               Cow position:
               chr14:39927274-39927438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               22, 59
               

               Conread position:
               1514-1661
               

               Cow position:
               chr14:46507039-46506889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               14, 70
               
Show alignments to all cow chromosomes.