Cow genome map


           Conread name:
           Ss1.1-Spl1-SPL010001G10.5
        

               Conread position:
               1230-1649
               

               Cow position:
               chr16:48889272-48888852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               186, 48
               

               Conread position:
               1253-1584
               

               Cow position:
               chr16:36289918-36289587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               13, 83
               

               Conread position:
               1271-1648
               

               Cow position:
               chr16:12429781-12429409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               153, 17
               

               Conread position:
               1275-1587
               

               Cow position:
               chr16:46651946-46652257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 24
               

               Conread position:
               1278-1571
               

               Cow position:
               chr16:31257313-31257611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               23, 36
               

               Conread position:
               1293-1572
               

               Cow position:
               chr16:53410849-53410581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               195, 94
               

               Conread position:
               1354-1649
               

               Cow position:
               chr16:53210352-53210049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               51, 33
               

               Conread position:
               1510-1640
               

               Cow position:
               chr16:19055942-19056072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               70, 21
               
Show alignments to all cow chromosomes.